| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0214 |
|---|
| Symbol | |
|---|
| ID | 4808632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 261339 |
|---|
| End bp | 262358 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640105627 |
|---|
| Product | phenylalanyl-tRNA synthetase, alpha subunit |
|---|
| Protein accession | YP_001036648 |
|---|
| Protein GI | 125972738 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAGC AGTTGAACAG TATCAGAGTT CAGGCAGAGC AGGAACTTTC CAATGTTGGA
ACCATTGCGG AACTGGAAAA CATCAGAGTC AAATATTTGG GCAAAAAAGG GGAACTTACC
GCCGTATTAA GAGGCATGGG TTCTCTGTCG CCGGAAGAAA GGCCGGTAAT AGGCCAGCTG
GCAAATGAGA TTAGGGCTTA TATTGAGAGC CGTATAGAAG AGGCCAGGAA CGAGCTTATA
AAAAAAGAAA GAAGTCAAAA ACTCGAGAGA GAAGTCATTG ACGTAACCAT GCCGGGAAAA
AGAAAGATGC TTGGAAAGAA ACATCCTTTG AGCATTGTGA TAGACGAGAT TAAAGATGTG
TTTATAGGAA TGGGTTACGA AATAGCCGAA GGTCCTGAGG TTGAGCTGGA CTATTACAAC
TTTGAAGCCC TCAACATTCC CAGAAACCAC CCGGCAAGAG ATGTACAGGA CACTTTCTAC
ATAAATAACA ACATATTACT CAGAACCCAG ACATCTCCCG TTCAGATCAG GGTTATGGAG
AACAAAAAAC CACCGATTAA AATAATCTGC CCGGGAAGGG TGTACCGCTC CGATGCTGTG
GATGCCACCC ATTCACCTAT ATTCCATCAA GTGGAAGGAC TGGTGGTGGA CAAGGGAGTT
ACAATGGGAG ACCTTGTCGG AACTTTAAGA GTGTTTGCAA AGAGTTTGTT CGGAGAAAAG
ACAGAAATAA GGCTGAGACC TCACCATTTC CCATTCACAG AGCCCAGTGC CGAGGTTGAT
GTTTCATGCT GGGCTTGCGG AGGAACAGGC TGCAGAATAT GTAAAAATGA AGGCTGGATA
GAGATTTTGG GCGCCGGAAT GGTTCATCCG AAGGTTCTGG AGGTTTGCGG CATAGACCCT
GAAGTATACA GCGGATTTGC TTTTGGTCTT GGCGTCGAAA GAACGGCCAT GGGAAGATTT
AATATCGATG ACATGAGACT TTTGTATGAA AACGATATCA GGTTCTTAAA ACAGTTTTAA
|
|---|
| Protein sequence | MKEQLNSIRV QAEQELSNVG TIAELENIRV KYLGKKGELT AVLRGMGSLS PEERPVIGQL
ANEIRAYIES RIEEARNELI KKERSQKLER EVIDVTMPGK RKMLGKKHPL SIVIDEIKDV
FIGMGYEIAE GPEVELDYYN FEALNIPRNH PARDVQDTFY INNNILLRTQ TSPVQIRVME
NKKPPIKIIC PGRVYRSDAV DATHSPIFHQ VEGLVVDKGV TMGDLVGTLR VFAKSLFGEK
TEIRLRPHHF PFTEPSAEVD VSCWACGGTG CRICKNEGWI EILGAGMVHP KVLEVCGIDP
EVYSGFAFGL GVERTAMGRF NIDDMRLLYE NDIRFLKQF
|
|---|
| |