| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0188 |
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| Symbol | rph |
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| ID | 4808676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 226792 |
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| End bp | 227583 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640105599 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001036622 |
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| Protein GI | 125972712 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00190846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAGAA TTGATGGAAG AGGCCAGTCT GATTTAAGAC CGGTAAAAAT AACGCGAAAC
TATATCAAGC ACGCCGAGGG CTCGGTTTTG ATTGAGATGG GGGATACAAA GGTAATTTGT
ACGGCCACTG TGGACGACAA AGTGCCTCCT TTTAAGAAAA ACACCGGAGA AGGATGGGTT
ACCGCGGAAT ATTCAATGCT GCCGAGGGCT ACTGCGGCCC GTAATCCAAG AGATATAAGC
AAACTGAAGC TCAGCGGAAG AAGCCAGGAA ATACAAAGGC TTATAGGAAG AGCACTTCGC
TCGGTGGTGA ATTTGAACCT TTTGGGAGAG AGGGAAATTA TAATAGACTG TGACGTTATT
CAGGCGGACG GCGGCACAAG AACCGCCTCG ATTACCGGCG GTTTTGTCGC TTTGGTGGAT
GCCTGCAAGA AACTTGTGGA TGACGGCATA ATTGAAAAAA TACCGGTGAC CGACTTTTTG
GCAGCGGTAA GTGTCGGTAT TGTAGACGGC GAGGAAATGC TTGATTTGTG CTACATGGAG
GATTCGAATG CTGCCACTGA CATGAATGTC GTGATGACAT CAAAAGGCGA ATTTATTGAG
ATTCAGGCTA CCGGTGAGCA ATTACCTTTC AAAAAAGAGC AGTTTGACAA ACTTTTAAGT
TTTGCGGAAA AAGGTATAAG TCAGTTGATT GAAATACAAA AAGATGCTTT GGGTCAGGTA
GCAAGTGAGG TTGGGAGAGT TACGAAAGAT GAGAAAATTT GTAATTGCAA CGAAGAACAA
GGGCAAGCTT AA
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| Protein sequence | MLRIDGRGQS DLRPVKITRN YIKHAEGSVL IEMGDTKVIC TATVDDKVPP FKKNTGEGWV
TAEYSMLPRA TAARNPRDIS KLKLSGRSQE IQRLIGRALR SVVNLNLLGE REIIIDCDVI
QADGGTRTAS ITGGFVALVD ACKKLVDDGI IEKIPVTDFL AAVSVGIVDG EEMLDLCYME
DSNAATDMNV VMTSKGEFIE IQATGEQLPF KKEQFDKLLS FAEKGISQLI EIQKDALGQV
ASEVGRVTKD EKICNCNEEQ GQA
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