| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0185 |
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| Symbol | |
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| ID | 4808673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 221399 |
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| End bp | 224245 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640105596 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_001036619 |
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| Protein GI | 125972709 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00443483 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGGG GTCTTTTCGT TCTGTTTGTT GCAATGGTTC TTGTATTCAA TTCTTTCACT
ATGTGTGCAG AAGCGCTGAA GCTTACTTAT GACGGCAAAG TGCATGAGTA TACGGGAAAT
ATTTACACAT TGAAAGTCGA CGGTGAAGTT GTCAATTCCG ATTTGCCTCC AATTATAATT
AACGGACGTT CTTTAGTCCC TGTCAGAGCG ATTTTTGAAA AGCTCGGTGC AAAGGTCGGA
TGGGATGCGG CGAGTAAAAA AGTGACAATA TCATATGACA GCAACACAAT AGAGCTCAAA
ATAAATGATG TAAATGCCCT GGTAAACGGA ACCAAAGTAG CGATGGAAGT TCCGGCAAAG
ATTATAAATG ACAGGACTGT GGTTCCTGTG CGCTTTGTCG GAGAGCAGCT GGGCATGGAA
GTCGGATGGA ATGCGGAAAA AGGCGAGATT ACTTTGGACA GCGGAAAAAG CGTTGTTGCC
AGCATAAATG ATATCAATTA TAAAATTGAC GGAAACTTGC ATCAGGTAAA AATAGAGCTC
GATAAATGCA GGGAATACAA AATAATGAGA GTTGCCAATC CCGACAGAAT TGTTGTGGAT
TTTCCCAATA CGAAGCTTTC AAATGCCAAC ACAAACATTA GTGTGGGCAG TGAGCTTATA
AGTTCGATAC GCTGCGGAAA TCCCGATACA AAAACCGCAA GAGTGGTGCT CGATGTGGTT
GGCCAGCCCC AGTACATAGT AAAAGAAGAG GGAAGCAATG TTGTATTGAA CCTTCAAAAG
CCAAATACGG GTAGACCATC CGGAACTGTG GGCAGCAATA AACTTGATGT TGAACATGTC
AGTAAAACCG ACCATGACGA AGTATATATA AAATGCGGGA CTGCTCCTGA ATACAATTCT
TTTACTCTTT CCGATCCTGA AAGAATTGTG ATTGACGTAT CAGGAGCGTA TATTGAGGGC
GAAATTAAAA ATATTGAAAC AAAAGGCAAC CTGGTAAAGT CCGTAAGATG TGCAAACCAA
AGCGGTAATG TGGCAAGAGT GGTGGTTGAT CTTCAGCAAA AGTTGAACCA TAAAATCATA
AAATCGGGAG AATATCTTAT TGTATACATA TCCAGAGCAC CTATTTCGGA AAATCCTGCA
GTTTCTTTGC CCAGCCGCGG AGGCACCGGC AAAGATGAAG GGTCAAGGGA CAATATTCTT
TATGTTGCCT ATGAACCTGA CGGTCAAAAG GACAAAGTTG TTTTAAGCCT TGACAGTTAC
GAGAATTACA ATATTGTAAA GAATGTTGAA AAAAATAAAA TTATTATCGA CATACCCAAC
GCCATAGGTC CTTCTGAGGC AAAAACAATC AGCGTTGACA GTGATATGGT CGGCAGCGTC
AAATATGTCG GCTTTGACAA GTCGTATGCA CAGGTGGAGA TTGGGCTTAA AAGCAAAATT
CAATACGAAG TAATTGAAAA AGAAGGCAGA CTTGAACTGG TTCTTTCCAA AGCTGCCGAA
GTTTCGCCGT CGCCATCTCC AACACCTACG CCTACACCGA CTCCGACACA GACACCTACC
TCTACGCCGA CACCGACGCA GTCGCCGACT CCAACTCCGA CTCCGACCCC GGTGCAGGTG
GTGAAGGATG GTTCTCTTTC AATAGCTTAT AACGTTGCAT CCACTTACAG CAAAGTCATA
CTTGGGATAC AGAATTATAA GAATTATAAT GTAAACCGTA TTTCAGACCC TGATCGTATT
GTGATTGACA TAACGGGGGC AAATGTTGAG AAAACTGCGA ATACCGTTGA GATAAAGAAG
GGATTTATAG AGGCAATAAG GTATTCGCAA TATGAAGTGG GAGTTGTCAG GGTTGTTATT
GATGTCAAAG ACAATCCGAA GCACGATGTG AAAAAATCGG GAGACAAATT GGAGATATAC
CTTAAAGATT CAGTTTCAGG TCAAAATTAT AAAAATATAA AGTATGTCAA CAACATGGAC
AGAATACACT TCATCTTGCA AGGAGCAAAG CTTACGGAGG GCGGAGCCGA CCTTAAGAAG
TTTTATACTG AAAAGTATGA CCTCGGCGGA AAAAGATATA CAATAACATT CCCTTCAAAC
CTTGCTGATA TTGGCAGCGG CATAATGCAG ATAAACGACG GAATAGTAGA TTATGTCAAG
ATTACTCAAA ATCCTGACAC AAAACAAACA AGCATGGAAT TTAACACAAA AGAAGCCTAT
AGTTATTTGA TAATTACCCG GGGTGACGTG AACAATACAA CCATCACACT GCTGAAGAAA
GCATCCAGGG ACGACAAGCT TGTGGTCATT GACCCCGGAC ACGGAGGTTT GGAAACCGGT
GCGGTGTACG GAGACTGCTA TGAAAAGGAT TTCAACCTCG ATATTGCAAA GAGACTGAAC
GCACTTTTAA AGAGTAAAGG TGTCAAAACT TATATGATTC GTGAGGATGA CAGTTATGTG
GGCTTGTATG AGAGAGCATA TATTGCAAAT ACTCTCAACG CCACACTGTT TTTAAGCATA
CACAATAATG CATATAATAC CAAGTCTCAT GGAACTGAGA CACTGTATTA TCCGACACCG
GCAGGAGCTA CCGGATTTAC CAGCAAGAGG TTTGCGCAGA TTATTCAAAG CCGCCTTGTC
AGCAAGCTGA AGACAAAGGA CAGGGGAATT GTGGAAAGAC CGAATTTGGT AGTTCTTAAA
GCGACTAAAA TGCCGGCGGC TTTGGCGGAA GTTGCGTTTA TGGACAATAG CGAAGAACTG
CAAAAGCTTA AAACGGAAGA ATTCAGGCAA AAAGCGGCGG AAGCACTGTG TGAAGCCGTA
ATTCAGGCTT TGGCGGAAGT AGAATAG
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| Protein sequence | MKRGLFVLFV AMVLVFNSFT MCAEALKLTY DGKVHEYTGN IYTLKVDGEV VNSDLPPIII
NGRSLVPVRA IFEKLGAKVG WDAASKKVTI SYDSNTIELK INDVNALVNG TKVAMEVPAK
IINDRTVVPV RFVGEQLGME VGWNAEKGEI TLDSGKSVVA SINDINYKID GNLHQVKIEL
DKCREYKIMR VANPDRIVVD FPNTKLSNAN TNISVGSELI SSIRCGNPDT KTARVVLDVV
GQPQYIVKEE GSNVVLNLQK PNTGRPSGTV GSNKLDVEHV SKTDHDEVYI KCGTAPEYNS
FTLSDPERIV IDVSGAYIEG EIKNIETKGN LVKSVRCANQ SGNVARVVVD LQQKLNHKII
KSGEYLIVYI SRAPISENPA VSLPSRGGTG KDEGSRDNIL YVAYEPDGQK DKVVLSLDSY
ENYNIVKNVE KNKIIIDIPN AIGPSEAKTI SVDSDMVGSV KYVGFDKSYA QVEIGLKSKI
QYEVIEKEGR LELVLSKAAE VSPSPSPTPT PTPTPTQTPT STPTPTQSPT PTPTPTPVQV
VKDGSLSIAY NVASTYSKVI LGIQNYKNYN VNRISDPDRI VIDITGANVE KTANTVEIKK
GFIEAIRYSQ YEVGVVRVVI DVKDNPKHDV KKSGDKLEIY LKDSVSGQNY KNIKYVNNMD
RIHFILQGAK LTEGGADLKK FYTEKYDLGG KRYTITFPSN LADIGSGIMQ INDGIVDYVK
ITQNPDTKQT SMEFNTKEAY SYLIITRGDV NNTTITLLKK ASRDDKLVVI DPGHGGLETG
AVYGDCYEKD FNLDIAKRLN ALLKSKGVKT YMIREDDSYV GLYERAYIAN TLNATLFLSI
HNNAYNTKSH GTETLYYPTP AGATGFTSKR FAQIIQSRLV SKLKTKDRGI VERPNLVVLK
ATKMPAALAE VAFMDNSEEL QKLKTEEFRQ KAAEALCEAV IQALAEVE
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