| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0175 |
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| Symbol | |
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| ID | 4808663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 211898 |
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| End bp | 213034 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640105586 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001036609 |
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| Protein GI | 125972699 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.122625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCTT TCTTTAAGTC AAGAGTTGCA AGAATTCTTC CCTTAATAGC TTTGTCTCTT
TCTCTGCTGT TTGCAGGATG TAACACCAGT CCCAAATTGA ATGGCGATTT GAAGTCACCG
GTTCCCAATA CCGCCGGACA GGATGCGGGA CAGGAAGGTG GTTCTTTGGC AACACCGACT
CCAACACCGA CACCTGAGCC AACGCCTACA ATTGATCTTC AAAGTGTCAA GCCTAATGAG
GCTGGCAAAA TAATGGTTGT TATGTTCCAT AATTTTGTTG AGTCTTTTAC TCCTAAGAGT
TATGATAAGG GTGAATACAC CACTACTTTC AGTGAGTTTG AAAAGCTGCT TCAAGACTTG
TATGACAGAG GTTACAGGCT TATCAGCATG AGTGATTATT TAAATAACAA TATTTCAGTG
CCTGCAGGAT GCATACCGAT AATATTTACA TTTGACGACG GAACATCGGG ACAGTTTAAT
TTGGTTGAAG AAAACGGAAC TCTCAAAGTA AATAAAAAAT CTGCCGTAGG AATTATGGAA
GAGTTTTATG AGAAGCATCC TGATTTCGGG CTTAAAGGCA CTTTCTATGT GAACCTTGGC
AACAGCACTT TTGAGGGTGC GGGAACTTTG CAACAGAGGC TTCAATATTT GGTTGACAAA
GGATTTGAAA TTGGGAACCA TACTTATACC CATATAAATC TGAAAGATAC CACAAGTGCT
CAAAAAATAC AGGAAGAGAT TGCTAAAAAC CAAAGGACTA TTGCTGAGCT TATACCCGGA
TATAAAATGA CTACTTTTTC TCTTCCGTAC GGACTTCCAT CTGTAGAAGG CCTGCATAGC
TATGTTATAA AAGGTAGTTA TGAAGGGGTG GAATACGAAC ATGCGGCAAT TATGGAGGTA
GGCTGGGATC CGGCCCATTC TCCGGTATCA AAAGATTTTA ACCCCCTCTC GACCCACAGG
GTTAGAGCTT CGGGAATTAA TCCTGTAGAT TGCGACCTGG CATGGTGGCT TAAAAATTTA
TCCAGGGAAG AGCAGTATAT AAGTGACGGA GATCCCAATA CCGTTACAGT TCCTAAGAAA
AATGAAGACA AAGTAGACAA GGATAAGCTA AAGGACAAAA AGCTCGTTAT ATATTAA
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| Protein sequence | MASFFKSRVA RILPLIALSL SLLFAGCNTS PKLNGDLKSP VPNTAGQDAG QEGGSLATPT
PTPTPEPTPT IDLQSVKPNE AGKIMVVMFH NFVESFTPKS YDKGEYTTTF SEFEKLLQDL
YDRGYRLISM SDYLNNNISV PAGCIPIIFT FDDGTSGQFN LVEENGTLKV NKKSAVGIME
EFYEKHPDFG LKGTFYVNLG NSTFEGAGTL QQRLQYLVDK GFEIGNHTYT HINLKDTTSA
QKIQEEIAKN QRTIAELIPG YKMTTFSLPY GLPSVEGLHS YVIKGSYEGV EYEHAAIMEV
GWDPAHSPVS KDFNPLSTHR VRASGINPVD CDLAWWLKNL SREEQYISDG DPNTVTVPKK
NEDKVDKDKL KDKKLVIY
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