| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0158 |
|---|
| Symbol | |
|---|
| ID | 4808646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 197773 |
|---|
| End bp | 199266 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640105569 |
|---|
| Product | ribonuclease G |
|---|
| Protein accession | YP_001036592 |
|---|
| Protein GI | 125972682 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1530] Ribonucleases G and E |
|---|
| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAGTG AGATTGTGGT AGATGTGGGG ATTAATGAAA AAAGAGTGGC TCTGTTGGAA
GACAGGGAAC TGGTTGAATT ATTTATAGAG AGAAATGATT GTGAAAGACT TGTGGGCAAT
ATTTACAGAG GCAGAGTGGA AAGTGTCCTG CCTGGAATGC AGGCGGCTTT TATAGATATC
GGATATGAAA AGAATGCTTT TTTGTATGTA GGTGATGCCA TACCTCAGAA AGAATTTTCC
GAAGATGATG AAGAAATCTA TAGCGATGTT AAGAGTTACA ATATCGAAGA GATATTAAGA
CCCGGTCAGG AAATAACGGT ACAGGTAACC AAAGAACCCA TAGGAACAAA AGGCCCAAGG
GTAACTACCC ATATAACGTT GCCGGGAAGG CAGATGGTGC TTCTTCCCAA CGCCGATTAC
ATTGGCATTT CTAGGAGAAT TGAGGATGAG GAGGAACGGG CAAAGCTAAG AAAAATAGCC
GAAAAGATCA AACCAAAGAA TATGGGAATT ATTGTAAGGA CTGTTTCGGA AGGCAAACGG
GAAGAAGATT TTAAAAGTGA TTTGAATTTT TTGGTCAAAC TTTGGGCAAA AATAAAACAA
AGAGAACAGA GCGGACCGGT TCCCAGGTGT TTGCACAAAG ATTTGAGTGT AATTTACAGA
GCAGTCAGGG ACATCTTTAC ATGGAACATT GACAGGTTTG TTATTAATGA CCGGCAGGAG
TACAATAAGG TTCTTGAGCT TGTTGAAATG ATTTCGCCGG CTTTGAAAAT GAGAGTGGAG
TATTTCAACA AAAATATTGA TTTGTTTGAG TACTACCAGA TTGACAGCAT GATACAGAAG
GCATTGGCCA AAAAGGTCTG GTTAAAATGC GGAGGATATA TTGTAATCGA GAGAACGGAA
GCTCTTACGG TTATTGATGT GAACACCGGG AAGTATGTGG GGGTAAACAA TCTCGAAGAC
ACCGTTTTAA GGACCAATCT TGATGCGGTC AAAGAAATCG GGAAACAATT GAGGCTAAGA
GACATCGGAG GAATAATTAT TATTGATTTT ATCGACATGC ATGATCCGGA ACATCAAAAA
CAGGTACTGG AAGCTTTAAA GCAGGTATTG AAAAAGGATC GCACCAAAAC CACTGTTGTC
GGCATGACCG GTCTTGGCCT TATTGAGATG ACGAGGAAAA AGGTTAGGGA AGGCTTGGAG
TCAATGATGC TTCAGGATTG TCCTTATTGT GAAGGAAGGG GGAAAATACT TTCGCCCGAG
TCTGTGGCAA GAAATGTTGA GAAAGAGATA AGCAAATACT TTACAAAAAC AATAGCAAAT
GCTATCATGG TTGAGGTTCA TCCTACTGTG GCCGAGGTGT TGAGAGGAGA AGACAACGAC
AACCTTGCAA GAATTCAGAA TCTGTTTAAC AAAAAAGTCA TAATAAAACC CTCGGCGGAA
GTGGGACATG AGGAAGTGAA GGGAAGTTGT AAAATAAAAT GCCGTAATAT ATAG
|
|---|
| Protein sequence | MVSEIVVDVG INEKRVALLE DRELVELFIE RNDCERLVGN IYRGRVESVL PGMQAAFIDI
GYEKNAFLYV GDAIPQKEFS EDDEEIYSDV KSYNIEEILR PGQEITVQVT KEPIGTKGPR
VTTHITLPGR QMVLLPNADY IGISRRIEDE EERAKLRKIA EKIKPKNMGI IVRTVSEGKR
EEDFKSDLNF LVKLWAKIKQ REQSGPVPRC LHKDLSVIYR AVRDIFTWNI DRFVINDRQE
YNKVLELVEM ISPALKMRVE YFNKNIDLFE YYQIDSMIQK ALAKKVWLKC GGYIVIERTE
ALTVIDVNTG KYVGVNNLED TVLRTNLDAV KEIGKQLRLR DIGGIIIIDF IDMHDPEHQK
QVLEALKQVL KKDRTKTTVV GMTGLGLIEM TRKKVREGLE SMMLQDCPYC EGRGKILSPE
SVARNVEKEI SKYFTKTIAN AIMVEVHPTV AEVLRGEDND NLARIQNLFN KKVIIKPSAE
VGHEEVKGSC KIKCRNI
|
|---|
| |