| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0129 |
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| Symbol | |
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| ID | 4808687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 157782 |
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| End bp | 159299 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640105540 |
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| Product | metal dependent phosphohydrolase |
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| Protein accession | YP_001036563 |
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| Protein GI | 125972653 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAC ATGTTTCATT GCTCAGGAAA AGATATGTTG ATTTGCGGGA TACATATCTT
GGCAGTGAGC TGAAAAAAGT TGAGTTGCTT TTTTATATTT CGGTTTCGAT AGCATTGGGG
CTTATACAAT ATAAGCTGCT AAATTATGAA AATACATACA ACATTCGAGC TTATATCAGC
CATATACAAT CATGCATTGT GATTCTTATG GCCTTTCGAT TTGGCTATGT GGGACTGGCC
ACGGCAGTGG TATTGGTTTT GGCTGAAACA ATATTCATAA TTGAAGAATA TTTGGTCAGT
TTCGATAAAT ATCTTTTACT TGGGCTTACG CTGAAATTCT TTACAATATT TGTAACCAGT
TTTATTGCAG TACTTACCAA CAGGCAGCAG ATTCAGAAGA AAAGGCTTGA ACGGATGGCA
ATTACGGATG AATTGACCGG GGCATACAAT CAGAGATTTT TTCACATGGT GCTTGAAAGT
GAGCTTGAGA AGGCAAAAAA TAATAACGGT TCTGTGAGCC TTATAATGAT TGACATAGAT
AACTTTAAAA TGTACAACGA TATTTACGGA CGTGACTTTG GTGACAATAT ATTGAGGACA
ACTGCAACAA TCCTTTCGGA AATTTTGGAC GAAGGCAGCT ATTTGTGCCG ATACGGCGGA
GATGAATTTG CTGTTATTAC TACAAATACC CGGCTCGATA ATTTAGAGGA TATGGCAAAC
AATCTTCGCC GGGAGTTTGA AAGACTTAAA CAAAAATATT ACAAACATAA ATTATACGAA
AAGGTAACAC TGTCCATTGG TTTGTCGGAA TACCCCAACA TGTCGCGGGA CAAAAATGAA
CTCATTTACC AGGCCGATAC AGCCTTGTAT CATGCAAAGA ACCTGGGAAA AGACAAGGTA
CATCTCTATC AGGACGCGTT AATGCAAATA CGCAAAAATA TCAGTTCCGA CCACCAGCAG
CTTATAGGAA TATTCAAGGG ATTGTTGAGT ACCATATCGG CAAAGGATAA ATATACTCAT
GGACATTGCG AGCGGGTGGC GGCTTATGCG GTGCTGATTG CGGAGGCAAT GGGACTGAGT
GCAAAAGAAA TCAGCACAAT TCAGTGTGCC GCTTTGTTGC ATGACATTGG AAAGATAGAA
ATGCCCAGGC ACATATTAAA TAAAAAAGAA GAACTGACTG AAGAGGAAAT AAAATATTTA
AGACAGCACC CTATATATAG TGAAAACATA CTTGAGCCTT TGGCGGACAT GGACAAGCTT
ACCGATTATG TAAGGCACCA TCATGAAAGA TATGATGGCA AGGGTTATCC GGACGGCCTA
AAAGGTAAGG AAATAAGCCT CGGTGCCAGA ATATTGTGTG TTGCAGACTC TTTTGATGCC
ATGGTGTCCG ACCGCCCGTA CAGTAAAAGC ATGTCAAAGG AAGATGCTTT TAAAGAACTT
GAGAAAAATG CGGGAACCCA GTTTGATCCG GAAATTGTAG AGATTTTCAT AAAAGCAATG
AAATCGTATG CCGCATAA
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| Protein sequence | MNKHVSLLRK RYVDLRDTYL GSELKKVELL FYISVSIALG LIQYKLLNYE NTYNIRAYIS
HIQSCIVILM AFRFGYVGLA TAVVLVLAET IFIIEEYLVS FDKYLLLGLT LKFFTIFVTS
FIAVLTNRQQ IQKKRLERMA ITDELTGAYN QRFFHMVLES ELEKAKNNNG SVSLIMIDID
NFKMYNDIYG RDFGDNILRT TATILSEILD EGSYLCRYGG DEFAVITTNT RLDNLEDMAN
NLRREFERLK QKYYKHKLYE KVTLSIGLSE YPNMSRDKNE LIYQADTALY HAKNLGKDKV
HLYQDALMQI RKNISSDHQQ LIGIFKGLLS TISAKDKYTH GHCERVAAYA VLIAEAMGLS
AKEISTIQCA ALLHDIGKIE MPRHILNKKE ELTEEEIKYL RQHPIYSENI LEPLADMDKL
TDYVRHHHER YDGKGYPDGL KGKEISLGAR ILCVADSFDA MVSDRPYSKS MSKEDAFKEL
EKNAGTQFDP EIVEIFIKAM KSYAA
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