| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0127 |
|---|
| Symbol | |
|---|
| ID | 4808685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 155714 |
|---|
| End bp | 156208 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640105538 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_001036561 |
|---|
| Protein GI | 125972651 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
|---|
| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00636988 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCA ATGTTGTACT GGTGGAGCCT GAGATACCCC AAAACACAGG AAATATTGCA
AGAACCTGTG CGGCGGTGGG GGCTAATCTT CATTTGGTCA AGCCTTTGGG GTTTTCAGTT
GAGGACAGAT ACTTAAAGCG TGCAGGTCTG GATTATTGGG ATAAAGTAAA TATAAAGTAT
TATGACAGTT TTAGTGAACT TAGGGATAAA TATAAGGAGC ACATTTTTTA TTATTCAACC
ACAAAAGCAC AAAAGTTATA CACCGATGTA AAATATCCTG ATGATTGTTT TATTGTTTTT
GGCAAAGAAA CGGCGGGTTT GCCGGAAGAA CTGCTTGTGG AAAACAAGGA ATGGTGCATC
AGGATTCCGA TGAGAGATGA TATCCGCTCT TTAAATCTTT CAAACTCTGT TGCCATAATT
GTATATGAAG CATTACGACA GAACAATTTT GCCGGACTTG TGCCTTATGG AAAACTGACT
AAATATACAT GGTAA
|
|---|
| Protein sequence | MAINVVLVEP EIPQNTGNIA RTCAAVGANL HLVKPLGFSV EDRYLKRAGL DYWDKVNIKY
YDSFSELRDK YKEHIFYYST TKAQKLYTDV KYPDDCFIVF GKETAGLPEE LLVENKEWCI
RIPMRDDIRS LNLSNSVAII VYEALRQNNF AGLVPYGKLT KYTW
|
|---|
| |