Gene Cthe_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0113 
Symbol 
ID4808739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp144814 
End bp145689 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content40% 
IMG OID640105524 
Producthypothetical protein 
Protein accessionYP_001036547 
Protein GI125972637 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTAC TGATAATTAC GGGAATTTCA GGAGCCGGTA AAAGTCTTGT TGTTAAATAT 
CTGGAAGATA TAGGTTTCTT CTGCGTGGAT AATCTTCCGC CTCTGCTCAT AGGCAAATTT
GCCGAAATCT GTCTCAAAAG CAGGGGAAAA ATAAGCAAAG TGGCTCTTGT CATAGATATT
AGAGGGGGAG AGCTTTTTAA CGATCTTGTT CCCGAACTCA ATGCTTTGAA AGAGTCGGGA
ATTGATTATG AAATTCTTTT CCTTGAAGCA TCGGATCAAG TGCTTATCAA AAGATACAAG
GAGAGCAGGC GTATTCATCC GCTTGCTCCT GAGGGAAGAC TGATTAAGGG TATAAAAACC
GAGAGGGAAA TTTTGTCGCA GATTAGAAAA AATGCAACTT ATATTATCGA CACGTCAAAT
TTAACGCCAA GACAGCTGAA AGAAGAGATT CTGGCCATAT TTGTCGAGGG CAGGAAATTT
GACGGAATGA TAGTAAATAT TATCTCTTTT GGCTTTAAAT ATGGTATTCC CATTGAATGT
GACCTGGTCT TTGATGTGAG ATTCATTCCC AACCCGTATT ATATAGAGAG TATGAAATAT
AAGACGGGGA AGGATGAAGA AGTCAGAAAT TATGTGATGA GTTTTGCGGA AACTGCTGAG
TTTATGACAA AACTTAAAGA CTTGGTGGAT TTTTTGATAC CGAATTATAT AAAAGAAGGC
AAGTCACAGC TTGTGATAGG AGTTGGGTGT ACCGGCGGAA GACATAGATC CGTCGCTATT
TCCGAGGCAT TGTTTTCGTA TCTTTGTGGC AGGGAACACA GGGTGTTTAT TGACCACAGG
GATATAGACA AAGATGGCAG GAGTAATCGA AGATGA
 
Protein sequence
MRLLIITGIS GAGKSLVVKY LEDIGFFCVD NLPPLLIGKF AEICLKSRGK ISKVALVIDI 
RGGELFNDLV PELNALKESG IDYEILFLEA SDQVLIKRYK ESRRIHPLAP EGRLIKGIKT
EREILSQIRK NATYIIDTSN LTPRQLKEEI LAIFVEGRKF DGMIVNIISF GFKYGIPIEC
DLVFDVRFIP NPYYIESMKY KTGKDEEVRN YVMSFAETAE FMTKLKDLVD FLIPNYIKEG
KSQLVIGVGC TGGRHRSVAI SEALFSYLCG REHRVFIDHR DIDKDGRSNR R