Gene Cthe_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0108 
Symbol 
ID4808732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp139692 
End bp140333 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content35% 
IMG OID640105517 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001036542 
Protein GI125972632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATAA AAGTTGGAGA TCTCGTATCC ATACGTCATT TTTCCGGTAC AAAGCTTTTC 
AAAAGCCTGG TACTCGAATC AAACAATGAT GAGGTTCTGC TGAAACTTAC GGAAGACATC 
GCTCTTCTCA ATTGTTCAAT TGGTGACCCC ATAGTTTTAG GCTGTGAATT AGAAGAAAAT 
GTTTATATCT CCAGCTGTAC AACTTTGAAC GTAGACAAAC AGCAAAACAC TCTAAAGCTT 
AAAATCGACA ACTACGAGAC AACTTCAAAT AAAAGACTTT TCGTGAGATT TCCCGTGTCA 
CTGTATGCCG AAGCTCGAAT CGGCGAGTCC AACAAAAAAT ATCTGGCAAT TGTCAAAAAT 
ATCAGTTTTA ACGGAATGAT GATTCATACC AAAGAAGATT TTCCATTGTT TCAGGAGCTC 
AAGTTTGACA TTCATGCCGA TATTCCCATA CATCTTAAAG CAACCATCAT AAGAAAAGTA 
AAAGATGAGT ATAATTACGA ATATGGTTTG AAAATCAATT ATACCGATGT ACATACTCCG 
AATCTTTTAA AGAAATATCT GATTCTTCTG AAAAAGGAAC AGGAAGAATT TATTAAAAAG 
TTTAAAGAAG AGCAAAATGA CACACCGCAA GATACAAAAT AA
 
Protein sequence
MEIKVGDLVS IRHFSGTKLF KSLVLESNND EVLLKLTEDI ALLNCSIGDP IVLGCELEEN 
VYISSCTTLN VDKQQNTLKL KIDNYETTSN KRLFVRFPVS LYAEARIGES NKKYLAIVKN 
ISFNGMMIHT KEDFPLFQEL KFDIHADIPI HLKATIIRKV KDEYNYEYGL KINYTDVHTP 
NLLKKYLILL KKEQEEFIKK FKEEQNDTPQ DTK