| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0104 |
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| Symbol | |
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| ID | 4808728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 136030 |
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| End bp | 137127 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640105513 |
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| Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase |
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| Protein accession | YP_001036538 |
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| Protein GI | 125972628 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTGAAA AAGAGTTTTT CATGAGTAGA GCCATTAAAC TAGCAAAACT TGGATGGGGA
AAAACCAATC CCAACCCTTT GGTGGGGGCG GTTGTTGTCA AGGATGGAAA AATAATTGCA
GAAGGTTACC ACAAGCAACT GGGAGGTCCT CATGCCGAAG TGGAGGCTTT TAACAACGCA
AAGGAGGACG TTGCCGGCGG CACTTTGTAT GTCAATTTGG AGCCATGTTC CCATTACGGC
AGGACGCCGC CCTGTGCTCA AAAAATTATT GATGTTGGGA TAAAAAAAGT GGTTGCAGCC
ATAAAGGACC CCAACCCGAA GGTTTCGGGC AGAGGTTTTG AAATGCTTAA AAACGCAGGA
ATTGAGGTTG AAGTCGGGGT ACTTGAGGAA GAGGCCATAA GACTCAACGA AATATTTATC
ACTTACATTG TAAAAAAGAA ACCTTTTGTA ATTTTAAAAA CGGCAATGAC ATTGGACGGC
AAGATAGCAA CAGCTTCGGG AGACTCCAAA TGGGTGACGG GGGAAAAAGC AAGAAATCAT
GTCCATGTGA TAAGAGACAG GGTTGCGGCA GTAATGGTGG GAATTAATAC TGTCCTGAAA
GATAATCCAT ACCTTACCAC AAGACTTCCC GACAAGGAAG GAAGCGATCC TGTGAGGATA
GTTGTGGACA GCAAAGGCTC AATTCCCCTG GACTCAAATG TTATAAATTC CAATTCAAAA
GCCGGAGTTA TACTTGCCAC TACCTCCCGT ATAGACAAGG AAAAGGAAAA AATGCTGATT
GACAAAGGAG TAAAAATCAT TAAGGCGGAC GGCAGTGACG GAAGAGTGGA TTTAAAACTT
CTGATGGATG AACTTTACAA ACTTGAAATT GACAGTGTGC TGCTGGAAGG AGGAGGTACG
CTGAACAGCT CTGCCATTTC CGCGGGAATT GTGGACAAAG TAATGTGTTT TATCTCTCCG
AAGATAGTGG GGGGAGAAAA TGCTCCCACC TCGGTTGAAG GAATCGGAGC ATTAAGAATG
TGTGAAGCCA TAGGAGTAAA AAATATCAGT GTTGTAAAGT TTGGGGAAGA CATACTTCTG
GAAGGATATA TAGAATGA
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| Protein sequence | MSEKEFFMSR AIKLAKLGWG KTNPNPLVGA VVVKDGKIIA EGYHKQLGGP HAEVEAFNNA
KEDVAGGTLY VNLEPCSHYG RTPPCAQKII DVGIKKVVAA IKDPNPKVSG RGFEMLKNAG
IEVEVGVLEE EAIRLNEIFI TYIVKKKPFV ILKTAMTLDG KIATASGDSK WVTGEKARNH
VHVIRDRVAA VMVGINTVLK DNPYLTTRLP DKEGSDPVRI VVDSKGSIPL DSNVINSNSK
AGVILATTSR IDKEKEKMLI DKGVKIIKAD GSDGRVDLKL LMDELYKLEI DSVLLEGGGT
LNSSAISAGI VDKVMCFISP KIVGGENAPT SVEGIGALRM CEAIGVKNIS VVKFGEDILL
EGYIE
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