Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0104 |
Symbol | |
ID | 4808728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 136030 |
End bp | 137127 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640105513 |
Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase |
Protein accession | YP_001036538 |
Protein GI | 125972628 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD [TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTGAAA AAGAGTTTTT CATGAGTAGA GCCATTAAAC TAGCAAAACT TGGATGGGGA AAAACCAATC CCAACCCTTT GGTGGGGGCG GTTGTTGTCA AGGATGGAAA AATAATTGCA GAAGGTTACC ACAAGCAACT GGGAGGTCCT CATGCCGAAG TGGAGGCTTT TAACAACGCA AAGGAGGACG TTGCCGGCGG CACTTTGTAT GTCAATTTGG AGCCATGTTC CCATTACGGC AGGACGCCGC CCTGTGCTCA AAAAATTATT GATGTTGGGA TAAAAAAAGT GGTTGCAGCC ATAAAGGACC CCAACCCGAA GGTTTCGGGC AGAGGTTTTG AAATGCTTAA AAACGCAGGA ATTGAGGTTG AAGTCGGGGT ACTTGAGGAA GAGGCCATAA GACTCAACGA AATATTTATC ACTTACATTG TAAAAAAGAA ACCTTTTGTA ATTTTAAAAA CGGCAATGAC ATTGGACGGC AAGATAGCAA CAGCTTCGGG AGACTCCAAA TGGGTGACGG GGGAAAAAGC AAGAAATCAT GTCCATGTGA TAAGAGACAG GGTTGCGGCA GTAATGGTGG GAATTAATAC TGTCCTGAAA GATAATCCAT ACCTTACCAC AAGACTTCCC GACAAGGAAG GAAGCGATCC TGTGAGGATA GTTGTGGACA GCAAAGGCTC AATTCCCCTG GACTCAAATG TTATAAATTC CAATTCAAAA GCCGGAGTTA TACTTGCCAC TACCTCCCGT ATAGACAAGG AAAAGGAAAA AATGCTGATT GACAAAGGAG TAAAAATCAT TAAGGCGGAC GGCAGTGACG GAAGAGTGGA TTTAAAACTT CTGATGGATG AACTTTACAA ACTTGAAATT GACAGTGTGC TGCTGGAAGG AGGAGGTACG CTGAACAGCT CTGCCATTTC CGCGGGAATT GTGGACAAAG TAATGTGTTT TATCTCTCCG AAGATAGTGG GGGGAGAAAA TGCTCCCACC TCGGTTGAAG GAATCGGAGC ATTAAGAATG TGTGAAGCCA TAGGAGTAAA AAATATCAGT GTTGTAAAGT TTGGGGAAGA CATACTTCTG GAAGGATATA TAGAATGA
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Protein sequence | MSEKEFFMSR AIKLAKLGWG KTNPNPLVGA VVVKDGKIIA EGYHKQLGGP HAEVEAFNNA KEDVAGGTLY VNLEPCSHYG RTPPCAQKII DVGIKKVVAA IKDPNPKVSG RGFEMLKNAG IEVEVGVLEE EAIRLNEIFI TYIVKKKPFV ILKTAMTLDG KIATASGDSK WVTGEKARNH VHVIRDRVAA VMVGINTVLK DNPYLTTRLP DKEGSDPVRI VVDSKGSIPL DSNVINSNSK AGVILATTSR IDKEKEKMLI DKGVKIIKAD GSDGRVDLKL LMDELYKLEI DSVLLEGGGT LNSSAISAGI VDKVMCFISP KIVGGENAPT SVEGIGALRM CEAIGVKNIS VVKFGEDILL EGYIE
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