| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0090 |
|---|
| Symbol | |
|---|
| ID | 4808714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 123353 |
|---|
| End bp | 123883 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640105499 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001036524 |
|---|
| Protein GI | 125972614 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCAA AACCGGTTAG GGTTAAAATA ATTTCGTATG CTGCTCTTAT ATTTATTATA
GCGCTAATTC AGTCGACGGT TTTAGAAAGC ATCAGCATAT TCAATATCAA ACCGAATCTG
TTGTTGATAT TCATTATTTC CGTGGCACTT TTAGGAAGCA ATATCGAGGG TGCCGTGACA
GGTTTTTTGT GCGGATTGAC TCAGGATATG CTTTCAGGAA GGGTTATTGG CTTTTATGCT
TTGCTGGGGC TTTATCTCGG CCTTGGAATT GCTTTGATAA ATAAAAGATT ATACAAAGAA
AATGTGTTGG TGGCAATTTT CACGACTTTT GTTTCTTCGA TAATATATGA ATTTGCCGTT
TATTTTTTTG TAAATGTGTT TAAAGGCTCT TTAGAGCTGA TTTTTCCTTT TAGATATATA
ATTTTGCCTG AGGCGGTTTA CAATAGTGCG GTGTCAATTG TCATATTTTT AATAGTTTTA
AAGATAAATC ACTGGTCTGA GGAATTGGAG CGGCTTTCGA GACGTTATTA A
|
|---|
| Protein sequence | MRAKPVRVKI ISYAALIFII ALIQSTVLES ISIFNIKPNL LLIFIISVAL LGSNIEGAVT
GFLCGLTQDM LSGRVIGFYA LLGLYLGLGI ALINKRLYKE NVLVAIFTTF VSSIIYEFAV
YFFVNVFKGS LELIFPFRYI ILPEAVYNSA VSIVIFLIVL KINHWSEELE RLSRRY
|
|---|
| |