Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0084 |
Symbol | |
ID | 4808779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 117726 |
End bp | 118271 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640105493 |
Product | hypothetical protein |
Protein accession | YP_001036518 |
Protein GI | 125972608 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGTCAA AGAAGATTGT ACCGAATAAA TTTGAGCAAT TTCTGAAAAA CAGAGAAAGC CTTATCGAGC AGTATGCCAA AGGGGACCTG ACAAAAGAGG AATTTATCGA AGCAAACTAC AGGTGCATAA ATTCCCTCGA TATAAAACCA TTTCAAAAAA TTGACAATGT AAAAAAAGCA ATATACAATT ATCAATACTA CAATGTTCTG GCAAAATATT ACCAAAAAAA GGCTCATGAC CTAAGTCGCA ATCATGAGGC GAGAAGTGAT TTTCTTGAAC AGTCTAATTA TTACTATTCA AAAAAGGACG AAGTTACGGC AAAACTTCTT AGACTTTTGG ACTTTAAAGG AATAGAAGCA TATTTTGTAA AGGTAAAGTC AAAAAATCTC AGAAAAAAGT TGTTTGAAAT TGTGCTTTTG GACTATGACA ACATTATTCT TCACTCAAAA AGTGAAGCTA TTTTAAACAT GCTTATGAAA GAAAATGTCT TCATAAACGA AGTAAGAAAT TCCCTGGTGG ACAGCTACAT AAACCAGAAG TATTAG
|
Protein sequence | MPSKKIVPNK FEQFLKNRES LIEQYAKGDL TKEEFIEANY RCINSLDIKP FQKIDNVKKA IYNYQYYNVL AKYYQKKAHD LSRNHEARSD FLEQSNYYYS KKDEVTAKLL RLLDFKGIEA YFVKVKSKNL RKKLFEIVLL DYDNIILHSK SEAILNMLMK ENVFINEVRN SLVDSYINQK Y
|
| |