Gene Cthe_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0080 
Symbol 
ID4808775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp110717 
End bp111148 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content39% 
IMG OID640105489 
ProductCheW protein 
Protein accessionYP_001036514 
Protein GI125972604 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0672928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCAGC AATACGTTAT ATTTAAGCTA AACGACAAAT ATTTCGGCGT CAATATAGCC 
CATGTAATGG AAATTATTTG GCCTCAAAAA GTATTTAAAG TGCCGGACAC CCCGCCTTAT
GTAGAAGGGC TTATAAATGT CCGGGGCAAG GTTTTCGCCC TGCTCAATCT GAAGGAAAAA
TTCCGTCTTC CGGATACAAA GGTAATGGAT GAAGAAGCAA AAATGATTAT TGTAATGATA
AATTCCAAAA CCCTTGCTTT CATGGTTGAT GTTGTCGAGG AAATCATCTC CATTGAAGAC
GAAGAAATAG TTGCCGTTTC AGACTCTTCC TTAAGTCACT GTAAAAAGTA TCTCAAAGGA
ACTGCCAAAT TTGGGGACCG TTCCATACTT CTTATTGACT TTGAACCCAT ACTGAATGAA
ACTCAAAAAT AG
 
Protein sequence
MSQQYVIFKL NDKYFGVNIA HVMEIIWPQK VFKVPDTPPY VEGLINVRGK VFALLNLKEK 
FRLPDTKVMD EEAKMIIVMI NSKTLAFMVD VVEEIISIED EEIVAVSDSS LSHCKKYLKG
TAKFGDRSIL LIDFEPILNE TQK