| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0058 |
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| Symbol | |
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| ID | 4808753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 90212 |
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| End bp | 90982 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640105467 |
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| Product | putative RNA polymerase sigma factor SigI |
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| Protein accession | YP_001036492 |
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| Protein GI | 125972582 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02895] RNA polymerase sigma-I factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAGTCC GGAAAATTAA TACCCATAAC AGGGAGAAAA AACTGGATGA TATAGTCTAT
GACGACTTTA TTTCTACCCT TAGACAGATA AAGGAAGGAA ATCATCAGCT CAGAGAAGAG
TTTATATCGG AATATAAACC CTTCATTTTG AAAGTTACCT CAAATGCCAC GGGAAAATAT
ATCGACACCC GCAACAGTGA TGAGTTTAGC ATTGCATTGT CCGCGTTTAA TGAAGCAATT
GATAAATTTG ACATCGAGAA AGGTTATAAT TTCTTTCTCT TTTCTGAGCA GGTAATAAGA
AGGCGCCTGA TTGATTATTC AAGAAGCAAC AAAGATGATA AGGAATATCC TTTTTCATTT
TTTGATGACG AATATTTTTA TAACAATGAA AAACTTTTAT CCAAGTCGTA TATTGGATTT
GAAGATATTG AGGCAAGGGA AGATATTGAA GAATTAAAGA AGAAGCTTCA GGAATTTGGC
ATAACATTTC TCGATTTGGT GTTAAATGTT CCGAAGCACA GGGATTCAAG GCAGCTTTGT
ATAAGGTTGG CCAAGATGCT GGCTGAGGAT GAGCAAATGT ACAATGCATT AATGAAGAAT
AAAAACATAC CCAGAAATGA ATTAAAAAAG AAAGCCAAGG TTCACGGGAG GACCATAGGC
AATAATAGAA AATATATTAT AGCGCTTTGT TTAATTTTCA GAAGTAACCT GAATCTTTCA
AAGAGATATT TGGAGTATTA TACTATGGAC GGGGAAAGTG ACCTTATATG A
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| Protein sequence | MEVRKINTHN REKKLDDIVY DDFISTLRQI KEGNHQLREE FISEYKPFIL KVTSNATGKY
IDTRNSDEFS IALSAFNEAI DKFDIEKGYN FFLFSEQVIR RRLIDYSRSN KDDKEYPFSF
FDDEYFYNNE KLLSKSYIGF EDIEAREDIE ELKKKLQEFG ITFLDLVLNV PKHRDSRQLC
IRLAKMLAED EQMYNALMKN KNIPRNELKK KAKVHGRTIG NNRKYIIALC LIFRSNLNLS
KRYLEYYTMD GESDLI
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