Gene Cthe_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0031 
Symbol 
ID4808796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp37585 
End bp38208 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID640105440 
Productputative membrane transporter 
Protein accessionYP_001036465 
Protein GI125972555 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000129229 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA AATCAGGGGA GCGTACACTT CTGGCTTCTG TGTTGATGAG CTCGCCGGGA 
CCGATAGTTG TGGGGACGGC ACTTTTTTTT GGCCGCTCGT CTACGCAGTT TGCAGACTTT 
ATACGGCGTA CGGCGGAACT AGGGGCAATA ATTGTGTCGT GGATAGTGTT CCGGATTGTA 
AATAGAAAGA ATGAAATCGA CACAGCATAC AGGAATAAAT TGGAACGCAC TGCAAATTTA 
TGTGTGGGAG CGGCAATGTG TCTGTCGGGA GCGGCTATGC TGTTTATTGC ATTGTTTTCG 
CCTGACACTG AAAAGGGCAA TGTTATCCCC GGACTTGTAA TTGCGGTGCT TGGTGTGATA 
ACAAACACAT GGTTTTGGCT TAGATACCGT AGGCTCAACC GCGAAAAACC GAATGCGATA 
CTTGCGGTAC AAAGCAGGCT TTATTGTGCA AAGGCTGCTG TCGATGCCTG TGTAACCTCT 
TCCCTGACAT TTGTTGCCGT TGCTCCTGCC CACCCCGCTT CATGGTATGT GGATTTGATT 
GGCTCGATAA TAGTTGCATT TTATCTTGTT TTAAACGGTA TTATTACAAT ACGCGGCAAA 
AATAACGTAA TGAATTGGAA ATGA
 
Protein sequence
MKSKSGERTL LASVLMSSPG PIVVGTALFF GRSSTQFADF IRRTAELGAI IVSWIVFRIV 
NRKNEIDTAY RNKLERTANL CVGAAMCLSG AAMLFIALFS PDTEKGNVIP GLVIAVLGVI 
TNTWFWLRYR RLNREKPNAI LAVQSRLYCA KAAVDACVTS SLTFVAVAPA HPASWYVDLI 
GSIIVAFYLV LNGIITIRGK NNVMNWK