Gene Cthe_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0030 
Symbol 
ID4808795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp36870 
End bp37580 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content44% 
IMG OID640105439 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_001036464 
Protein GI125972554 
COG category[I] Lipid transport and metabolism 
COG ID[COG0170] Dolichol kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0036147 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGTGG AATTTATAAA AGGTTACGGG ATATTGCTTT GCTATTTTGC TGTCTGCGCC 
TCAAGTGCGC TTGTCCTGCG TCGTTTTGTT CCCATGCCCG ATGAACTTTT CCGCAAGATT
TTGCACATGA TACTTTTAGG ATCCATATTC GGATGGATGT ATGCCTTTAA AACATGGTGG
GTATCGGCAA TTGCGGCTAT AGTATTTATA TTGATGGTTT TCCCGATTCT TGCATTTGCC
GAACGTGTAC CCGGCTATTC CCAATTGCTT ATAGAGCGTA AAAAAGGTGA GATTAAGAGA
AGTCTGATAG TAGTGTTTGT TATGTTTGCC ATACTGATTT GTCTTTGCTG GGGATGGCTC
GGGGAAAGAT ATTTAGTGCT GGCATCGGTT TTGGCATGGG GATTGGGCGA TGCGGCAGCG
GCATTGGTGG GAAAACGTTT CGGGCGTCAT TTCGTCAGAG GAAGACTGGT TGAAGGATGC
AAGAGTCTTG AAGGTACTTT TGCGATGTTT GTTGTATCCT TTATTTCGGT GATGATTGTC
TTGATAGCTC ATGACAAGGT AGAGTGGTAT GCTTGTATTC CAATTGCGGC AGCAACTTCG
GCGGTTTGTG CAATTGTGGA ACTTTATACA AAGAACGGTA TGGATACGCT GACATGTCCT
TTGGCTGCAG CAGCGGTTTT AATACCGTTG GTTCATTTGT GGGGGGTATG A
 
Protein sequence
MFVEFIKGYG ILLCYFAVCA SSALVLRRFV PMPDELFRKI LHMILLGSIF GWMYAFKTWW 
VSAIAAIVFI LMVFPILAFA ERVPGYSQLL IERKKGEIKR SLIVVFVMFA ILICLCWGWL
GERYLVLASV LAWGLGDAAA ALVGKRFGRH FVRGRLVEGC KSLEGTFAMF VVSFISVMIV
LIAHDKVEWY ACIPIAAATS AVCAIVELYT KNGMDTLTCP LAAAAVLIPL VHLWGV