| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0022 |
|---|
| Symbol | |
|---|
| ID | 4808787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 28483 |
|---|
| End bp | 29649 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640105432 |
|---|
| Product | 2-amino-3-ketobutyrate coenzyme A ligase |
|---|
| Protein accession | YP_001036457 |
|---|
| Protein GI | 125972547 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0282575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGATT TTCAAGGTGC TTTGAAAGAT ATAAAAAACA AGGGATTATA CAGGGAGTTT
CGAAATGTTA ATGCTGCCCA GGGCCCGTAT ACCGTTATTG ACGGAAGAAA AATGCTTATG
ATGTCATCAA ATAATTACCT GGGCTTGTGT GATGATATAA GGCTTAAAAG AGCTGCGATA
GAATCTATTC GTAAATTTGG TGTGGGAGCC GGAGGCTCAA GGCTGACTTG CGGAAACTTT
GAGCTTCACA GGGAGCTGGA GGAGAGGCTT GCAAAATTTA AGGATGTGGA AAGCTGTATT
GTTTTTGGAA GCGGATATGC CGCAAATATA GGAGCAATAT CGGGAATTGC GGACAAAAAC
TGGGTCATAT TCTGCGACCG TCTGAACCAT GCCAGCATTG TGGACGGCAT TCGCCTAAGC
GGTGCAAAAC TTGTGGTGTA TAAACACTGC GACATGGAGG ACCTTGAAAG CAAGATTGTA
CGCTATCATA CCGGCAAAAG CCTTATAGTA ACGGATGGCG TGTTCAGCAT GGACGGGGAT
GTGGCACCGG TGGATAGGAT TGTGAAGTTG GCTAAAAAAT ACAATCTTAT GACAATGGTG
GATGATGCCC ATGCCACAGG AATTTTGGGA GAAAAGGGAA GGGGGACGTC GGAGTACTTT
GGCCTTAAAG ATGCTGTTGA TATAAGCATG GGTACTTTGA GCAAGGCTTT TGGTGTTGAA
GGGGGATTTG TTGCAGGAAA GAGAAAGCTT GTTGATTTTT TACGGCACAA GGCCAAAAGC
TTTATTTACT CTACTGCTCC GCCGCCTCAT AATATGGCTG CGGCGTTAGA AGCTTTGAAT
ATCATAGAAA CGGAGCCGCA GGCAAGAAAG GAATTGGCTG AAAAATCCGT GTGGCTAAGA
AACAGGCTTA TAGAAAAAGG TTTTAACGTG CCCAAAGGGG TGACGCCGAT AATACCGCTT
ATGGTGGGAG ATGTAAATAC TGCAGTAGAG TTTAGTATGC TGCTTTATAA CGAAGGGATA
TATATTCCTG CCATCAGGCC GCCAACAGTT CCTAAAGGAA CGAGCAGGCT TAGAATTTCC
ATAATGGCTT CCCATTCCTA TGAAGACATG GAGTTTGCCC TTAAAAACCT TGTCCGGTTC
GGAAGGAAGT TGGGGATAAT ACCATAA
|
|---|
| Protein sequence | MYDFQGALKD IKNKGLYREF RNVNAAQGPY TVIDGRKMLM MSSNNYLGLC DDIRLKRAAI
ESIRKFGVGA GGSRLTCGNF ELHRELEERL AKFKDVESCI VFGSGYAANI GAISGIADKN
WVIFCDRLNH ASIVDGIRLS GAKLVVYKHC DMEDLESKIV RYHTGKSLIV TDGVFSMDGD
VAPVDRIVKL AKKYNLMTMV DDAHATGILG EKGRGTSEYF GLKDAVDISM GTLSKAFGVE
GGFVAGKRKL VDFLRHKAKS FIYSTAPPPH NMAAALEALN IIETEPQARK ELAEKSVWLR
NRLIEKGFNV PKGVTPIIPL MVGDVNTAVE FSMLLYNEGI YIPAIRPPTV PKGTSRLRIS
IMASHSYEDM EFALKNLVRF GRKLGIIP
|
|---|
| |