Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0005 |
Symbol | |
ID | 4808818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 9715 |
End bp | 10572 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640105415 |
Product | hypothetical protein |
Protein accession | YP_001036440 |
Protein GI | 125972530 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000670757 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAGA AATTGGTTTT ACTTATAATA AGTATACTGT GTTTTACTGC CTTAACGGGT TGTTGGATAG TCAGAAGTGA TCTTTCCGGC GATATTATTA TAGGTGATGG TCATGGAGGG ACTTCTCATA GTATTATCAA ATATAATCCC GCTACAAATA AATTTGAAAG TGTCGAACCG GGTCTTTACT ATGAAGTGGA ATATAATGAT GATAAATCAA AGATATTGTG TTACAGGTTT TTAGAAAACA GTGAGGTGAG GCGTTTTGAG ATATGTGAGT ATGATATTAA ATCTAAAAAA TTTGGTGAAC CTATTTTTAT TCCCGGCGAT TCACAGAAGT TTAAAGGTAG TGTTAAATAC GTGCCCAATT CCGACAGAAT TAGTTTTGTT TTAGATTATG AACTTCATAT TTATGATAGA TCCTCAGGGA CTCTTACTAA ATTATTTGAG GTGGCATTTA ATTCGTACTC ATGGGATAAT ACGGGTAAAA AGTTACTTTA TGGTGATTAC GATGAAAACA TATATATATA TGATATGGAG AGCAATGAAA AGAGAAAAAT TTTAACAGGT ATATGCCCCG TTTACTCAAA CAGCAATGAA TATATAGCAT ATATAGGAAT AGATCAGAGG TTAACTGTTT ATAATGTTAA CACAGGAAAA AAATGGAGAA CCGTACCAGT TGACGATAGT GCAAGATATA TTTTTTCCCC AGATGACAAG TATATTCTAT TGGGAACAGA ATATGCAGAC CTTATGAGTT TTCCGCATTA CACATTGTAT ATTTTGGATT ATAAGACAGG AAAGAAGAAG AGATTATTTG GCGGTGAAGG AAATGTTCCC AGTCTTGATT GGAAATAG
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Protein sequence | MSKKLVLLII SILCFTALTG CWIVRSDLSG DIIIGDGHGG TSHSIIKYNP ATNKFESVEP GLYYEVEYND DKSKILCYRF LENSEVRRFE ICEYDIKSKK FGEPIFIPGD SQKFKGSVKY VPNSDRISFV LDYELHIYDR SSGTLTKLFE VAFNSYSWDN TGKKLLYGDY DENIYIYDME SNEKRKILTG ICPVYSNSNE YIAYIGIDQR LTVYNVNTGK KWRTVPVDDS ARYIFSPDDK YILLGTEYAD LMSFPHYTLY ILDYKTGKKK RLFGGEGNVP SLDWK
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