Gene Cthe_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0005 
Symbol 
ID4808818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp9715 
End bp10572 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content33% 
IMG OID640105415 
Producthypothetical protein 
Protein accessionYP_001036440 
Protein GI125972530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000670757 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGA AATTGGTTTT ACTTATAATA AGTATACTGT GTTTTACTGC CTTAACGGGT 
TGTTGGATAG TCAGAAGTGA TCTTTCCGGC GATATTATTA TAGGTGATGG TCATGGAGGG
ACTTCTCATA GTATTATCAA ATATAATCCC GCTACAAATA AATTTGAAAG TGTCGAACCG
GGTCTTTACT ATGAAGTGGA ATATAATGAT GATAAATCAA AGATATTGTG TTACAGGTTT
TTAGAAAACA GTGAGGTGAG GCGTTTTGAG ATATGTGAGT ATGATATTAA ATCTAAAAAA
TTTGGTGAAC CTATTTTTAT TCCCGGCGAT TCACAGAAGT TTAAAGGTAG TGTTAAATAC
GTGCCCAATT CCGACAGAAT TAGTTTTGTT TTAGATTATG AACTTCATAT TTATGATAGA
TCCTCAGGGA CTCTTACTAA ATTATTTGAG GTGGCATTTA ATTCGTACTC ATGGGATAAT
ACGGGTAAAA AGTTACTTTA TGGTGATTAC GATGAAAACA TATATATATA TGATATGGAG
AGCAATGAAA AGAGAAAAAT TTTAACAGGT ATATGCCCCG TTTACTCAAA CAGCAATGAA
TATATAGCAT ATATAGGAAT AGATCAGAGG TTAACTGTTT ATAATGTTAA CACAGGAAAA
AAATGGAGAA CCGTACCAGT TGACGATAGT GCAAGATATA TTTTTTCCCC AGATGACAAG
TATATTCTAT TGGGAACAGA ATATGCAGAC CTTATGAGTT TTCCGCATTA CACATTGTAT
ATTTTGGATT ATAAGACAGG AAAGAAGAAG AGATTATTTG GCGGTGAAGG AAATGTTCCC
AGTCTTGATT GGAAATAG
 
Protein sequence
MSKKLVLLII SILCFTALTG CWIVRSDLSG DIIIGDGHGG TSHSIIKYNP ATNKFESVEP 
GLYYEVEYND DKSKILCYRF LENSEVRRFE ICEYDIKSKK FGEPIFIPGD SQKFKGSVKY
VPNSDRISFV LDYELHIYDR SSGTLTKLFE VAFNSYSWDN TGKKLLYGDY DENIYIYDME
SNEKRKILTG ICPVYSNSNE YIAYIGIDQR LTVYNVNTGK KWRTVPVDDS ARYIFSPDDK
YILLGTEYAD LMSFPHYTLY ILDYKTGKKK RLFGGEGNVP SLDWK