| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0001 |
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| Symbol | |
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| ID | 4810536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 104 |
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| End bp | 1723 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640105411 |
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| Product | recombinase |
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| Protein accession | YP_001036436 |
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| Protein GI | 125972526 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC AGCAGCAAAC AAGAACGGCA ATCTATTGCA GGCTCAGCCG GGACGATGAG
CAAAGCGGCG ACAGCATGAG CATTGAAAAC CAGCGTAGTA TGCTTACCCG CTATGCTAAG
GAAAATGGAC TGGAAATCAT AGACTGGTAT ATTGATGACG GATGGAGCGG TACCAACTTT
GACAGGCCGG ACTTCCAACG GATGAAAAGC GACATTGAGG ACGGGAAAAT AGACATTGTA
CTGGTGAAGG ATTTAAGCCG GTTAGGGCGC AACCAGATAG AAACCAGCCT TTGCATCCAG
GTGTTTTTCC CGCAGCACGA TGTCCGTTTC ATTGCAGTAA GCGAAAACAT TGACACTGCC
AAGGGCGAAG ATGACTTCAT GGAACTGCGC AACCTGTTCA ATGAGTGGTT TGTGCGGGAC
ACAAGCCGAA AAGTAAAAAA CGGCTACCGC CAGCGGGCAC TCAACGGGGA CTATACCGGA
GCCTTCGCTC CCTACGGATA CAAAAAGGAC GAGCAGGACA AGCACAAGCT GGTGCCGGAT
GAAAATGTGG CGCATGTGGT CAAAAGGATA TTCCAGATGG CAGTAGAGGG GTACAGCCCT
TACAAAATCA GCATGGCGCT ACGAGCGGAT AAAATCCTTA CACCAAGGGC GTATGTGGCA
CAGGAATACC AGCGGTATGC AAACGTGTTT AATCCTCAAT ATCCATATGA TTGGGGAGCC
ACGACCATCA AAATCATCAT ACAAAACAAG GTATATCTTG GGCACATGGT AAGCCACAAA
TACACCAAAA AGTCCTTTAA AACGAAAGAA GTCGTAGCTG TGCCGGAAAA TGAATGGATT
GAGGTCAAAA ACACTCATGA GCCGCTAATC GATGAAGAAA CCTTTGAACT GGCGCAAAAA
ATCATCCGGG TAAAAAAGCG TCCTACCAAA GAAGGAGAAC ATCAGATATT TGCCGGGTTG
CTCAGATGCT CCACCTGCGG ACAAAGCCTA TCTTTTGCAA GGGGCGGCAA TAGCAAATAC
AGCGGCGGTA AAGGAGGACG CGGCAGCTTT GCTTGTAACC AATCCCGGCG CAAGGGTAAG
GAATATTGCA GCTTTCATTA CATCAGTTAC CTTGACATCT ATACCGTCAT TTTGGAGGAC
ATACGGAAAA ATGCAGCTAT TGCAAGAGAA AACGAAGCCG CCTTTGTGGA GATGGTGTCA
GACATCAGCA AGGCTAAGCT CAAAAAGCAA GTATCGGCGG CAGCTAAAGA AAAGGAAAAG
CTAAGGCACA GGGAAAACGA ACTGCAAGCT ATTTTAAAAA AGCTCTATGA GGACAATGCT
CTGGGAAAAA TCACTGATGA ACAGTTTATT TCCCTGTCAA AGGACTTCAC CGACGAGCAG
AGACAGATAA AAGAGCGGCT AAAGGCACTG GAAAATATCC TAAGCCAAGT GACAGAAAAG
CAAGAAAATA CAGCGAAATT CCTTGAACTG GTGCGGGAAT ACACCGATAT TAAGGAATTA
ACCAAGCCAA TACTCAATGA GCTGATCGAC AAGGTGGTAG TCTTTGACGC AGAAAAGGCC
AGAGGCGACC GGGTACAGAG AATTGACATT TACTATAGGT TTGTAGGGTT AATTGCGTAA
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| Protein sequence | MKKQQQTRTA IYCRLSRDDE QSGDSMSIEN QRSMLTRYAK ENGLEIIDWY IDDGWSGTNF
DRPDFQRMKS DIEDGKIDIV LVKDLSRLGR NQIETSLCIQ VFFPQHDVRF IAVSENIDTA
KGEDDFMELR NLFNEWFVRD TSRKVKNGYR QRALNGDYTG AFAPYGYKKD EQDKHKLVPD
ENVAHVVKRI FQMAVEGYSP YKISMALRAD KILTPRAYVA QEYQRYANVF NPQYPYDWGA
TTIKIIIQNK VYLGHMVSHK YTKKSFKTKE VVAVPENEWI EVKNTHEPLI DEETFELAQK
IIRVKKRPTK EGEHQIFAGL LRCSTCGQSL SFARGGNSKY SGGKGGRGSF ACNQSRRKGK
EYCSFHYISY LDIYTVILED IRKNAAIARE NEAAFVEMVS DISKAKLKKQ VSAAAKEKEK
LRHRENELQA ILKKLYEDNA LGKITDEQFI SLSKDFTDEQ RQIKERLKAL ENILSQVTEK
QENTAKFLEL VREYTDIKEL TKPILNELID KVVVFDAEKA RGDRVQRIDI YYRFVGLIA
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