Gene RSP_4275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_4275 
Symbol 
ID4796462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_009008 
Strand
Start bp20372 
End bp20869 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content71% 
IMG OID640103056 
Productsigma24, FecI 
Protein accessionYP_001033905 
Protein GI125654712 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGTCCG AACACCTCCT TCAGCTCTAC GTCTCGGAAC GCGAGCGGAT GGAGCGGCAG 
ATCGCCCGCC GGATCGGCTG CGCGAGCCTC GCGCGTGACA TCGTCCATGA CATCTTCCTG
CGTCTGTGGG AGCGTGCCAC GCGGCTGAAC GGGGAGCCTG CGGCCTATCT CAGTCGCTGC
GCGCGCAACG CGGCCGTCGA TCACCTGCGC GCGGAGCAGG CCCGGGCGCG GCTGCTGGCC
GAGGCCGCCC GACGCGACGA GGGTCTGCAT GCGCCCTCGG CGGAAGACGC GATGGGCGCC
CGCGACGCGC TGCAGCGGAT CGATCTGGCT CTGCTCGCCC TGCCGGAGAA GACCCGGCAC
ATCTTCCTGC TCAACCGCGT CCATGGCCGG AGCTTTTCCG AAATCGCCGG AGCTTTCGGC
ATGTCGGAGC GCGCGGTGGC CAAGCACATG GCCAAGGCCG TCGCCGCCTG CGCCGCCGCC
GCAGAGGTCG GGGCTTGA
 
Protein sequence
MQSEHLLQLY VSERERMERQ IARRIGCASL ARDIVHDIFL RLWERATRLN GEPAAYLSRC 
ARNAAVDHLR AEQARARLLA EAARRDEGLH APSAEDAMGA RDALQRIDLA LLALPEKTRH
IFLLNRVHGR SFSEIAGAFG MSERAVAKHM AKAVAACAAA AEVGA