| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3929 |
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| Symbol | atpD |
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| ID | 4796502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009007 |
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| Strand | - |
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| Start bp | 96780 |
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| End bp | 98174 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640103026 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_001033875 |
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| Protein GI | 125654681 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.114623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGGAC GGGTGACATC GGTTCGAGGG CCGGTCCTCG ACATCCGTGT CGAGGGACCT
CTGCCCGCGA TCGGCGACGT GGTGGAGGTG GGCTCCCTCC CCGTCGTGGC GGAGATCCAG
GCCCATCTCG GCGCCGCCGA TGTCCGGGCC ATCGCGCTGC ACTCGACGCA GGGCATCGCC
CGCGGCGAGA CGGTCCGCAC GACGGGCGGG CCGCTCCGGG TGCCCACGGG GCCGGCCGTG
CTCGGGCGGC TTCTCGATGT GGCGGGCCGC CCCGCCGATC TGGGCCCGCC GATCCCCGCC
GGGGCGCCCC GCGCGCCGAT CCTGCACCCC GCCCCGCCGC TCGCCGCGCA GGACGCGCGC
TTTCAGGTCT TCTCCACCGG CATCAAGGTG CTCGACCTGC TGGCCCCGCT GGCCCAGGGC
GGCAAGACCG CGATGTTCGG CGGCGCGGGC GTGGGCAAGA CCGTGCTGGT GATGGAGCTG
ATCCGCGCCA TGGTTTCGGG CTATGACGGG ATCTCGGTCT TCGCGGGCGT GGGCGAACGC
TCGCGCGAGG GGCACGAGAT GCTGGGCGAG ATGAAGGCCT CGGGCGTGCT CGACCGCACC
GTGCTGGTCT ACGGCCAGAT GAACGAGCCG CCCGGCGCGC GCTGGCGCGT GCCGCTGACC
GCGCTCACCA TCGCCGAGGG CTTCCGCGAC GGCGAGGGGC GCAACGTGCT TCTGCTCATC
GACAATGTGT TCCGCTTCGT GCAGGCGGGG GCCGAGGTCT CGGGGCTTCT GGGCCGGATG
CCCTCGCGCG TGGGCTATCA ACCGACGCTC GAGACCGAGG TCGCGGCGCT GCAGGAGCGC
ATCGCCTCGG TCGGGCGCGC CTCGGTCACG GCGATCGAGG CGGTCTATGT CCCGGCCGAC
GATTTCACCG ACCCCGCCGT GACCGCGATC AGCGCCCATG TCGACAGCAC GGTGGTCCTG
TCGCGGCAGC TGGCGGCCGA GGGGATCTAT CCCGCGATCG ATCCGCTGGC CACCACCTCC
GTCCTGCTCG ATCCGGCGGT GGTGGGCGAG GAGCATGCCC GCGTGGCGGG GCGGCTGAAG
GAAGCGATCG AACATTACCA CGAGCTGCGC GACGTGATCG CGCTTCTGGG TATCGAGGAG
CTCGGCCGCG AGGAGCAGCT GATGGTGGGC CGCGCCCGCA AGCTGCAGCG CTTCCTGACC
CAGCCCTTCT TCGTCGCCGC CGCCTATACC GGCATGGAGG GCCGCTCGGT TCCGGTGGCC
GAGACGGTGC AGGGCTGCGC GGCGATCCTC GGGGGGGAGT GCGACGACTG GGACGAGGGC
TCGCTCTACA TGATCGGCAC GCTTGCGGAG GCGCGCGCAC GGGAAGAGGC GCGCCGCCGG
AAGGGGGCCG CATGA
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| Protein sequence | MTGRVTSVRG PVLDIRVEGP LPAIGDVVEV GSLPVVAEIQ AHLGAADVRA IALHSTQGIA
RGETVRTTGG PLRVPTGPAV LGRLLDVAGR PADLGPPIPA GAPRAPILHP APPLAAQDAR
FQVFSTGIKV LDLLAPLAQG GKTAMFGGAG VGKTVLVMEL IRAMVSGYDG ISVFAGVGER
SREGHEMLGE MKASGVLDRT VLVYGQMNEP PGARWRVPLT ALTIAEGFRD GEGRNVLLLI
DNVFRFVQAG AEVSGLLGRM PSRVGYQPTL ETEVAALQER IASVGRASVT AIEAVYVPAD
DFTDPAVTAI SAHVDSTVVL SRQLAAEGIY PAIDPLATTS VLLDPAVVGE EHARVAGRLK
EAIEHYHELR DVIALLGIEE LGREEQLMVG RARKLQRFLT QPFFVAAAYT GMEGRSVPVA
ETVQGCAAIL GGECDDWDEG SLYMIGTLAE ARAREEARRR KGAA
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