Gene RSP_3883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3883 
Symbol 
ID4796478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_009007 
Strand- 
Start bp51698 
End bp52714 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content68% 
IMG OID640102994 
ProductABC di/oligopeptide transporter, ATPase subunit 
Protein accessionYP_001033843 
Protein GI125654649 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAC ATGCCCCTTC CCCTGCCTCC CCCGCTGCCG GACCGGCCCC GCTGCTGGAA 
GTGGCGGATC TCTCGGTCAG CATCGGCGGC GTGCCGATCA TCAACAAGGT CTCGTTGACC 
CTGAACGAGG GCGAGGTCGT CGGGCTGGTC GGGGAATCCG GCAGCGGCAA GAGCGTCTCG 
TCCCTGGCGA TCATGCGCCT GCTGCCGAAG GAGGCCGCGA TCACCGCCAG CCGGTTGCGC 
CTTCTGGGCG AGGATCTGTT GCAGGCGACC GAGCGGCGCT GCGAGCAGCT GCGCGGCAGC 
GCCATCGCCA TGATCTTTCA GGAACCGATG ACGGCGCTCA ATCCGGTGCT GACGGTGGGC 
GAGCAGATCA TCGAGACAGT GATCCGCCAC GAAGGGGTCG GTCGCCGTGT GGCGCGCGCC 
CGTGCCATCG ACGCTCTGGG GCGGGTCGGC ATTCCGGCGG CGGCGCAGCG TGTCGATGAC 
TATCCGCATC AGATGTCGGG CGGCATGCGG CAACGCGCGA TGATTGCCGT GGCGCTGGCC 
TGCCAGCCGC GGGTCCTGAT CGCCGACGAG CCGACCACCG CGCTCGATGT CACCATTCAA 
GCCCAGATCC TCGAGTTGTT GCAGGATCTG CAGGAAGAGT ACCGGATGGG TACGGTGATG 
ATCACCCATG ACCTCGGGGT CGTCTCGTCC TTCGCCGACC GGGTGATGAT CATGTATTCC 
GGCCGGGTGA TCGAAGAGGC GCCGGCCGGT GCGGTCTTCG ATGCGCCGCG CCATCCCTAT 
ACCCGCGGGC TGCTGGCCTC CATCCCCTCC AGCGAGGTGG ACACCGACCG GCTCTATGCG 
ATCCCCGGGA CGGTGCCGCC GGCTTTCGAT CCACCGCCGG GCTGCCGTTT CGAGCCGCGC 
TGTGCCCATG CCGCCGCCGG CTGCCGCCTT GCCCAACCAG CGCTGCTGGC ATGCGGTCCC 
GACCATCGCG CCGCCTGCCT GCGGCTGGAC GAGATCACTC CTGCAGGAGC CCCGTGA
 
Protein sequence
MTQHAPSPAS PAAGPAPLLE VADLSVSIGG VPIINKVSLT LNEGEVVGLV GESGSGKSVS 
SLAIMRLLPK EAAITASRLR LLGEDLLQAT ERRCEQLRGS AIAMIFQEPM TALNPVLTVG 
EQIIETVIRH EGVGRRVARA RAIDALGRVG IPAAAQRVDD YPHQMSGGMR QRAMIAVALA 
CQPRVLIADE PTTALDVTIQ AQILELLQDL QEEYRMGTVM ITHDLGVVSS FADRVMIMYS 
GRVIEEAPAG AVFDAPRHPY TRGLLASIPS SEVDTDRLYA IPGTVPPAFD PPPGCRFEPR 
CAHAAAGCRL AQPALLACGP DHRAACLRLD EITPAGAP