Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSP_3854 |
Symbol | |
ID | 4796448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides 2.4.1 |
Kingdom | Bacteria |
Replicon accession | NC_009007 |
Strand | + |
Start bp | 20963 |
End bp | 25648 |
Gene Length | 4686 bp |
Protein Length | 1561 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640102968 |
Product | ICE nucleation protein |
Protein accession | YP_001033817 |
Protein GI | 125654623 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACT TCAGCAGCAA GACCACAGCA GAGATCGCGG CCCTGACGAG CGCCGAGGTC GCCAGCATGT CGAGCCAGGA TCTGGCCGCC CTCTCCACCG CCCAGATCGC GGCGCTCACC GCCCAGCAGA TCGGCTGGGT CAAGGCGGCG TCGCTGAAGG GGTTGGGGGA TGCGCAGGTG GTGGCGCTGA CGACGGCGCA GGCGGCGGCG CTCGGCTCGG CGCAGCTGGC CGCGCTGACG ACGGCGCAGG TGGCGGCGAT GGAGACGGCC GATCTCGCGG CGCTCTCGGC CACGGGGGTG GCGGGGCTGA CTTCGGCGCA GCTCGGGGGG CTCTCGACCG GTCAGGTGGC GGCCCTCACC ACGGCGCAGG TCGCGGCCCT GTCCAGCGTG GCGGTCAAGG GTCTGGGCTC GGTCCAGGCC TCGGGTCTCA CGACGGCCCA GGTGGCCGCC CTGTCGACCG CCCAGCTCAA AGCCTTCTCG ACCGCGGGCA TGACGGGGCT CGGCACGGCG CAGATCGTGG CGCTCTCGAG CGCGCAGGCG GCGGTGCTCG GCTCGGCACA GGTCGCGGCG CTCACGACGG CGCAGGCGGC GGCGATGGAG ACGGCCGATC TCGCGGCCCT CACCAGCGTG GCGGTGAAGG GGCTGAGCTC GACCCAGGTG GGCGCGCTGA CCACGGCGCA GGTGGCGGCG CTGACCACGG GACAGCTCGG CGCGCTCTCG ACCGGGGCGC TGAAGGGCCT GACCACGGCG CAGGTGGTTG CCCTGACCAC GGCGCAGGCG GCCGGGCTCG GCTCGGCGCA GGTGGCGGGC CTCTCGAGCA CGCAGATCGC GGCGCTGGAG ACGGCGGATC TGGCCGCCCT CTCCTCGGCG GGGCTGAAGG GGCTCGGATC GGCGCAGGCC GCGGGCTTGA CGACGGCGCA GGTGGCGGCG CTCACGACGG CTCAGGTGGG CCAGCTTTCG AGTGCCGCGC TGAAAGGGCT CGGCACGGCG CAGGTGGTGG CACTGACGAC CGCGCAGGCG GCGGCGCTCG GCACGGCGCA GGTGGGCGCG CTCTCGACCG CACAGGTGGC GGCGCTCGAG ACCGTCGATC TCGCGGCGCT CTCGACGGCG GCAGCGAATG CCCTGACCTC GGCTCAGGCC GCGAGCCTCA CGACGGCGCA GGTGGCCGCG CTGACGACGG CGCAGGTTGC GGCGCTCTCG ACGGGGGCGG TGAAGGGGCT GAGCTCGACC CAGGCGGGCG CGCTGACCAC GGCACAGGTG GCGGCGCTGA CCACAGGACA ACTGGGCGCA CTCACGACGG CGGCGCTGAA GGGCCTGACC ACGGCGCAGG TGGTGGCACT GACCACGGCG CAGGCGGCGG GGCTCGGCTC GGCGCAGGTG GCGGGGCTCT CGAGCACGCA GATCGCGGCG CTGGAGACGG CGGATCTGGC CGCGCTTTCC ACGACGGGGC TGAAGGGTCT GGGCTCGGCG CAGGCCGCGG GCCTGACCAC GGCGCAGGTG GCGGCGCTCA CCACGGCTCA GGTGGGCCAG CTCTCGAGTG CCGCGCTGAA AGGGCTCGGG ACGGCGCAGA TCGTGGCGCT GACGACGGCG CAGGCGGCGG CGCTGGGGTC GACGCAGGTG GCCGGGCTCT CGACCGCGCA GGTGGCGGCG CTGGAGACGG CCGATCTCGC GATGCTCTCG ACCGCGGGGG TGAAGGCGCT GAGCTCGACG CAGGTGGGCG CGCTGACGAC GGGGCAGGTG GCGGCCCTGA CCACGGCGCA GGCCGCCCAG CTCTCGACGG CGGCGCTGAA GGGCCTGAGT TCGACGCAGG TGGCGGCCCT GACGACGGGG CAGGTGGCGG CCCTGACCAC GGCCCAGCTC GGCGCGCTGA CGACGGCGGC GCTGAAGGGC GTGACCACGG CGCAGGTGGT GGCGCTGACC ACGGCGCAGG CGGCGGGGCT CGGCTCGGCG CTGCTGGCGG GCCTGTCGAG CACGCAGATC GCAGCGATCG AGACGGCGGA TCTGGCCGCG CTCTCCACCA CCGGGCTGAA GGGTCTGGGC TCGGCGCAGG CGGCGGGCCT GACCACGGCG CAGGTGGCCG CCTTCACCAC GGCGCAGGTG GGGCAGCTTT CGACGGCGGC GCTGAAGGGG CTCGGCACGG CGCAGGTGGT GGCGCTGACC ACGGGCCAGG CGGGGGCGCT CGGCTCGGCG CAGGTGGCGG GTCTCTCGAC CGCGCAGGTG GCGGCGCTCG AGACGGCCGA TGTCGCGGCG CTCTCGACGG CGGGGGTGAA GGGCGTGGGC TCGGCGCAGG CGGCGGCCCT CGGCTCGGCG CAGGTGGCAG CGCTGACGAC GGCGCAGGTG GGCCAGCTTT CGACCACGGC CCTGAAGGGC TTCGGCTCGG TGCAGGCTTC GGGTCTCACC ACGGCGCAGG TGGCGGCGCT GACCACGGCG CAGCTCTCGC AGCTCTCGAC GGCGGCGGTG AAGGGGCTCG GCACCGCGCA GATCGTGGCG CTGACCACGG GCCAGACGGC AGCGCTCGGC TCGGCGCAAC TGGGCGCCCT CTCGACGGCG CAGGTGGCGG CCTTCGAGAC GGCGGATGCC GCGGCGCTGA CCACGACGGC GCTGAAGGGG CTGACCACGG CGCAGGTGGT GGCGCTGACG ACGGGTCAGG CGGCGGCGCT CGGCTCGGCG CAGGTCGCGG GCCTGTCGAG CACGCAGATC GCGGCGCTCG AGACGGCGGA TCTCGCGGCC CTGACCACCA CGGCGGTGAA GGGCCTGGGC TCGACGCAGG TTTCGAGCCT GACGACGGGG CAGGTGGCGG CGCTCACCAC CGTGCAGGTG GCGGCGCTGA GCACGGCGGC CGTGAAGGGC GTGGGCTCGG TGCAGGCCTC GGGGCTGACG ACGGCGCAGG TGGCGGCGCT GACCACGGCC CAGGTGGCCC AGCTCTCGAC GGCGGCGCTG AAGGGGCTCG GCACGGCGCA GATCGTGGCG CTGACCACGG CCCAGGCGGC CAAGCTCGGC TCCGATCAGG TCGCCGCCCT CTCGACGGCG CAGGTGGCGG CGCTGGAGAC GGCGGATCTG GCGACCCTCT CGGCCACGGG CGTGAAGGGC TTCGGATCGG CACAGGCGGC GGCCCTCGGC TCGGCACAGG TGGCGGCGTT CACCACGGCG CAGGTGGCGG CGCTGACCAC GGCGGCGGTG AAGGGCTTCG GCTCGGTGCA GGCCTCGGGC CTCACCACCG CGCAGGTGGC CGCGCTGACC ACGGCGCAGC TCTCGCAGCT CTCGACGGCG GCGGTGAAGG GGCTCGGCAC GGCGCAGATC GTGGCGCTGA CCACGGGCCA GACGGCGGCG CTCGGCTCGG CGCAGCTGGG TGCCCTCTCG ACGGCGCAGG TGGCGGCCTT CGAGACGGCG GATGCCGCGG CGCTGACCAC GACGGCGCTG AAGGGGCTGA CCACGGCGCA GGTCGTGGCG CTGACCACGG GTCAGGCGGC CGCCCTCGGC TCGGTGCAGG TGGCGGGTCT CACGACCGCG CAGATGGCGG CGCTCGAGAC GGCGGATCTC GCGGCCCTCA CCACCACGGC GGTGAAGGGG ATCACCACCG CCCAGATGGG GGCGCTGACG ACGGGACAGG TGGCAGCCCT CACCACGGCG CAGGTGGCCG CGCTTGCGGG CACGGCGGTG AAGGGACTGT CCTCGACCCA GGCGGGGGCG CTGACGACGG CACAGGTGGC GGCGCTGACC ACGGCCCAGG TGCCCCAGCT CTCGACGGCG GCGCTGAAAG GGCTCGGCTC GGCCCAGATC GTGGCGCTGA CCACGGCCCA GGCGGCCGTC CTCGGCTCGG CGCAGCTGGG CGCCCTCTCG ACGGTGCAGG TGGCGGCGCT CGAGACGGTC GATCTCGCGG CCCTGACCAC CGCGGCCGTG AAGGGCCTCG GCTCGGCCCA GGTCGCGGGC CTGACCACGG GCCAGGTGGC GGCCCTCACC ACGGCGCAGA TGGCCCAGCT CTCGACGGCG GCGATCGCGG GTCTGGGATC GGTGCAGGCC TCCGGCCTGA CCACGGGCCA GGTGGCGGCC CTCACCACCG ATCAGCTCGC CCGGATCACC ACCGCGGCGG TGAAGGGGCT CGGCACGGCG CAGATCGTGG CTCTGACCAC GGCGCAGGCG GCGACGCTCG GCTCGGCGCA ACTGGCCGCG CTTTCGACGG CGCAGGTGGC GGCCTTCGAG ACGGCGGATG TGGCGGCGCT GACCACCGCA GCGGTGAAGG GCTTCGGGAC AGCGCAGGTG GCGGCGCTGA CCACCGGGCA GGCGGCCGCC CTTGGCTCGC GTCAGGTGGG CGCGCTTTCC ACGGCGCAGG TGGCGGCGCT CGAGACGGCG GATCTCGCAG CCCTCACCAC CGCGGCCGTG AAGGGTCTGG GATCGGCGCA GGCGAAAGTC CTGACGGCGG CGCAGATGGC CGCGCTCACC TCGGCTCAGG TGGCGGCCCT CACCACGACC GCCGTGGCAG GCTTCGGCTC GGTGCAGGCG GCGGCGCTCA CCACGGCGCA GATGACGGCG CTCACCACCG CGCAGATCCC CACCCTGACC ACGGCCGCCA TCAAGGGTCT CGAAACCGCC GATATCGCGG CGCTCACCAC GACGCAGGCG TCGGCCTTCA CGGCCACGCA ACTGGGGGCC ATGTCGAGCG CCCAGATCGC GGCTCTCTTC CTCTGA
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Protein sequence | MTDFSSKTTA EIAALTSAEV ASMSSQDLAA LSTAQIAALT AQQIGWVKAA SLKGLGDAQV VALTTAQAAA LGSAQLAALT TAQVAAMETA DLAALSATGV AGLTSAQLGG LSTGQVAALT TAQVAALSSV AVKGLGSVQA SGLTTAQVAA LSTAQLKAFS TAGMTGLGTA QIVALSSAQA AVLGSAQVAA LTTAQAAAME TADLAALTSV AVKGLSSTQV GALTTAQVAA LTTGQLGALS TGALKGLTTA QVVALTTAQA AGLGSAQVAG LSSTQIAALE TADLAALSSA GLKGLGSAQA AGLTTAQVAA LTTAQVGQLS SAALKGLGTA QVVALTTAQA AALGTAQVGA LSTAQVAALE TVDLAALSTA AANALTSAQA ASLTTAQVAA LTTAQVAALS TGAVKGLSST QAGALTTAQV AALTTGQLGA LTTAALKGLT TAQVVALTTA QAAGLGSAQV AGLSSTQIAA LETADLAALS TTGLKGLGSA QAAGLTTAQV AALTTAQVGQ LSSAALKGLG TAQIVALTTA QAAALGSTQV AGLSTAQVAA LETADLAMLS TAGVKALSST QVGALTTGQV AALTTAQAAQ LSTAALKGLS STQVAALTTG QVAALTTAQL GALTTAALKG VTTAQVVALT TAQAAGLGSA LLAGLSSTQI AAIETADLAA LSTTGLKGLG SAQAAGLTTA QVAAFTTAQV GQLSTAALKG LGTAQVVALT TGQAGALGSA QVAGLSTAQV AALETADVAA LSTAGVKGVG SAQAAALGSA QVAALTTAQV GQLSTTALKG FGSVQASGLT TAQVAALTTA QLSQLSTAAV KGLGTAQIVA LTTGQTAALG SAQLGALSTA QVAAFETADA AALTTTALKG LTTAQVVALT TGQAAALGSA QVAGLSSTQI AALETADLAA LTTTAVKGLG STQVSSLTTG QVAALTTVQV AALSTAAVKG VGSVQASGLT TAQVAALTTA QVAQLSTAAL KGLGTAQIVA LTTAQAAKLG SDQVAALSTA QVAALETADL ATLSATGVKG FGSAQAAALG SAQVAAFTTA QVAALTTAAV KGFGSVQASG LTTAQVAALT TAQLSQLSTA AVKGLGTAQI VALTTGQTAA LGSAQLGALS TAQVAAFETA DAAALTTTAL KGLTTAQVVA LTTGQAAALG SVQVAGLTTA QMAALETADL AALTTTAVKG ITTAQMGALT TGQVAALTTA QVAALAGTAV KGLSSTQAGA LTTAQVAALT TAQVPQLSTA ALKGLGSAQI VALTTAQAAV LGSAQLGALS TVQVAALETV DLAALTTAAV KGLGSAQVAG LTTGQVAALT TAQMAQLSTA AIAGLGSVQA SGLTTGQVAA LTTDQLARIT TAAVKGLGTA QIVALTTAQA ATLGSAQLAA LSTAQVAAFE TADVAALTTA AVKGFGTAQV AALTTGQAAA LGSRQVGALS TAQVAALETA DLAALTTAAV KGLGSAQAKV LTAAQMAALT SAQVAALTTT AVAGFGSVQA AALTTAQMTA LTTAQIPTLT TAAIKGLETA DIAALTTTQA SAFTATQLGA MSSAQIAALF L
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