Gene RSP_3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3852 
Symbol 
ID4796494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_009007 
Strand
Start bp16649 
End bp18823 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content73% 
IMG OID640102966 
ProductABC export transporter, fused inner membrane and ATPase subunits 
Protein accessionYP_001033815 
Protein GI125654621 
COG category[V] Defense mechanisms 
COG ID[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 
TIGRFAM ID[TIGR01846] type I secretion system ABC transporter, HlyB family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.382058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCCT TCGATTCCCA GCTTCCCGGG TCCATCGCGC TCGACACGCC CGTGCTGTCG 
ACGCTGCGCG CGGTGTTTCT GGTGGCGGCC CATCACGGGG TGCTGCTCGG CCCCGACGAG
CTGCCCCCGC TCGAGACCGG CGATTTCGCG CCCGATCTGC TGCGGCTTCT GGGCGGCAAG
GGGCTGCGCT GCCGGCTGCT GGCCGATGCG GGCTGGCGCA CCGCCTCGCG GCTCGGGCAG
GCCTATCCCG CGCTGGCGGA GCTGCGGGGC GGGCACTGGG CGGTGCTGGT CCATGCGGGC
GGGGCCGAGG GCGCGCGGAC CGTGGCCCTC CTCGATCCGC GGAACGAGGC CCAGGGGGTG
CAGCCCCTGC CCTGGGAGGA CTTCGCCCGG GACTGGACCG GCCGGCTGAT CCTGATCGGG
CGCCCCGACC GGCCGAGGGC CGCCGAGACC GCCTTCGGGC TGCGCTGGTT CCTGCCCGCG
CTCGCGCGCG AGAAGGGGCT CTTTCTCGGC GTCGCGGTGG CGGTGGTGAT CGGCAACCTG
ATCTCCTACG CGCTGCCCCT CCTCATGCAG GCGATGATCG ACCGGGTGAT CGCCTACCGG
GCCTGGAACA CGCTCGCCGC GGTCGCCGCG GTCTTCGTGC TGCTGGCGCT GTTCGACGCG
GGCTTCGGCT ATGTCCGCCA GCGGCTGAGC CAGATCGCGG GCGGCCGGAT CGACGCCCAT
CTGGGGGCCG AGAGCGTGGC CCATCTGCTC TCGCTGCCCA TGACGCTGTT CGAGACCACG
CCCGCGGGCG TGCTCGCGCG CAACATCCAG CAGACCGACA GGATCCGCCA GTTCCTGACC
GGGCGGCTGC TGCAGACCCT GCTCGACGCG GCCCTCCTGC CCGTGCTCTT CGCCACGCTG
GCCTTCCTGT CGGGCCGGCT CGCGCTGGTG ATCGCGGCCT ACGGGATCGC CATCGCGGGC
TGCATCGCCC TCATGCTGCC GCTCCTCCAG CGGCGGCTGA ACGCGGTCTA TGCGGTCGAG
GCCGAGCGGC AGGCGCTTCT GGTCGAGACG CTGCACAACA TGCGCGCGGT GAAATCGCTC
GCGGTCGAGC CCGCCCGCGG CGCGCTCTGG GAGGAGAGCC TCGCCCTCTC GGTGCGCCGG
CAGTGGGATC TGGGCCGCGT CTCGGCCGTC ACGAGCACGC TCACCAGCCT GCTCGAGCGG
CTGATGCAGG TGAGCGTGGT GGCCTTCGGC GTGGCGCTGG CGCTCGAGGG CGCGATCACG
GTGGGCACGC TCGTGGCGGT GCTGATGCTG GCCGGGCGGG TCAGCGGGCC GCTCGTCCAG
ATCGTGGGGC TCGTCAACGA ATGGCAGGAG GCCGCCCTGT CGATCGGGAT GCTGCGCCGG
ATCATGGATC ATCCGCCCGA ACGGCCCGAC ACCGCCGCCC TCGCCCGCCC CGCCCTCACC
GGCGCGCTCG AGATCCGGGG GGTGAGCTTC GCCTATCCCG GCGCCGCCAC GCCCGCGCTC
GATCAGGTGA GCCTCGCCAT CGAGCCCGGG CAGGTGATCG GCATCGTCGG GCGCTCGGGC
TCGGGCAAGA CCACGCTCAC CCGGCTCATC CAGGGCATCG AGACCCCGCA GGCCGGGCTG
ATCCTGTTCG ACGGGATCGA CATCCGCAGC ATCGCGCTCG GCCCTCTGCG GCGGCAGGTG
GGGATCGTGC TGCAGGACAA TCTGCTCTTC CGCGGCACGC TGCGCGAGAA TATCGCCCTC
GCCCGCCCCG AGGCCGGGCT CGAGGCGGTG GTGCGCGCGG CCGCCCTTGC GGGGGCCGAC
GAATTCATCC GCCGCCTGCC GCGGGGCTTC GACACGCCCG TCGAGGAGGG GGGCGCGAAC
CTCTCGGGCG GCCAGCGCCA GCGGGTGGCG ATCGCCCGCG CGCTGCTCAC CGATCCGCGC
ATCCTGATCC TCGACGAGGC CACGAGCGCG CTCGACCCCG AGTCCGAGGC GGTGGTCAAC
CGCAACCTCG CCGCCATCGC CCGCGGCCGG ACCATGATCG TGGTCTCGCA CCGGCTCTCG
TCCCTCGTGC GCGCCGACCG GATCGCGGTG CTCGACCAGG GCCGGCTCGT GGCCTTCGCC
CCGCACGAGG CGCTGCTCGC GGGCTGCGAG ATCTATGCCC ATCTCTGGCG CCAGCAGACC
GAGCATCTGT CATGA
 
Protein sequence
MAAFDSQLPG SIALDTPVLS TLRAVFLVAA HHGVLLGPDE LPPLETGDFA PDLLRLLGGK 
GLRCRLLADA GWRTASRLGQ AYPALAELRG GHWAVLVHAG GAEGARTVAL LDPRNEAQGV
QPLPWEDFAR DWTGRLILIG RPDRPRAAET AFGLRWFLPA LAREKGLFLG VAVAVVIGNL
ISYALPLLMQ AMIDRVIAYR AWNTLAAVAA VFVLLALFDA GFGYVRQRLS QIAGGRIDAH
LGAESVAHLL SLPMTLFETT PAGVLARNIQ QTDRIRQFLT GRLLQTLLDA ALLPVLFATL
AFLSGRLALV IAAYGIAIAG CIALMLPLLQ RRLNAVYAVE AERQALLVET LHNMRAVKSL
AVEPARGALW EESLALSVRR QWDLGRVSAV TSTLTSLLER LMQVSVVAFG VALALEGAIT
VGTLVAVLML AGRVSGPLVQ IVGLVNEWQE AALSIGMLRR IMDHPPERPD TAALARPALT
GALEIRGVSF AYPGAATPAL DQVSLAIEPG QVIGIVGRSG SGKTTLTRLI QGIETPQAGL
ILFDGIDIRS IALGPLRRQV GIVLQDNLLF RGTLRENIAL ARPEAGLEAV VRAAALAGAD
EFIRRLPRGF DTPVEEGGAN LSGGQRQRVA IARALLTDPR ILILDEATSA LDPESEAVVN
RNLAAIARGR TMIVVSHRLS SLVRADRIAV LDQGRLVAFA PHEALLAGCE IYAHLWRQQT
EHLS