Gene RSP_3843 details

Gene Information

• Locus tag: RSP_3843
• Symbol: rfbC
• ID: 4796466
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodobacter sphaeroides 2.4.1
• Kingdom: Bacteria
• Replicon accession: NC_009007
• Strand: +
• Start bp: 8376
• End bp: 8939
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640102957
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase related protein
• Protein accession: YP_001033806
• Protein GI: 125654612
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0675992
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAGATTG AAGAAACGGA ACTGCCGGGT GTCCTGATCC TGACGCCGCG GGTCTTCGGC 
GATGCGCGGG GCAGCTTCTG CGAGGCCTGG AACCGGGCCA CGCTCCAGGG GCTTGGGATC 
GATCTCGATT TCGTGCAGGA CAACCAGTCG ATCAGCGCTC CCGTGGGCAC GGTGCGCGGG 
CTGCATTATC AGGCGCCGCC CCACGCTCAG GACAAGCTCG TCCGCGTGGG CCATGGCGCG 
ATCCTCGATG TGGCGGTCGA TGTGCGGGTG GGCTCGCCCA CCTACGGCCG GTGGGTGGGG 
GTGGAGTTGA CAGCCGGCAA CGCCCGCCAG CTTCTGGTGC CGAAGGGCTT CCTGCACGGT 
TTCGTCACGA GAGAGCCCGA CACGGTCGTC CTCTACAAGA CCACCGATGT CTATGCGCCC 
GACTGCGACG GGGCGGTGCA TTTCGCCGAT CCCGACCTCG GCATCGACTG GGGCATCGAT 
CCGGCCTCGG CCGTGCTCTC CGACAAGGAT GCGCGCGCGC CGCGCTTCGC CGACTGGACC 
AGCCCCTTCA GCATCGAGGT CTGA 

 

Protein sequence

MQIEETELPG VLILTPRVFG DARGSFCEAW NRATLQGLGI DLDFVQDNQS ISAPVGTVRG 
LHYQAPPHAQ DKLVRVGHGA ILDVAVDVRV GSPTYGRWVG VELTAGNARQ LLVPKGFLHG 
FVTREPDTVV LYKTTDVYAP DCDGAVHFAD PDLGIDWGID PASAVLSDKD ARAPRFADWT 
SPFSIEV