Gene Mlab_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1657 
Symbol 
ID4795251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1685702 
End bp1686334 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content52% 
IMG OID640100342 
Producthypothetical protein 
Protein accessionYP_001031085 
Protein GI124486469 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000901813 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTATG ATCTCTATGT GGTAACCGAC GAGAATCTCT CGAACGGATA TTCCCATGCA 
GAGATAGCAA AGCTTGCAGT CGACGGCGGG GCCAACGTGA TTCAGCTTCG CGATAAGGAT
ATGGACTCCG CATCCCTCTT CACCGAAGCA GTCAAAATCC GCATGATCAC CAAGGACAAA
GCCCTCTTCA TCGTCAACGA CCGGCTGGAT ATCGCCCTCG CCTCGAAAGC GGACGGCGTT
CATCTGGGGC AGAGCGATCT ACCGGTCGAT GTCGTACGAC GCCTTGTTCC GGAGAATTTC
ATCATCGGCA TATCGATCGG CTCGGTTGAA GAGGCGTTGA AAGGGGTCAA AGACGGAGCG
GATTATGTAG CGGTGAGTCC GGTTTTTTCA ACCGGATCAA AACCCGATGC CGGAACCGGC
CATGGGATCT CCTGTATTTC CGCAGTAAGA CAGGCTGTCG AAAAAGATAT CCCAGTTCTT
GGAATCGGCG GCATCAACTG CGACAATATT CCGGAAGTCA TCAAAGCAGG ATTAGACGGG
ATATGCGTCA TATCCGCCGT TGTGAGTGCC CCGGATATTA CAAAAGCTGC GGAAGATCTG
TGTCAAAAGA TCAGGAGTGC AAAGAATGAG TGA
 
Protein sequence
MKYDLYVVTD ENLSNGYSHA EIAKLAVDGG ANVIQLRDKD MDSASLFTEA VKIRMITKDK 
ALFIVNDRLD IALASKADGV HLGQSDLPVD VVRRLVPENF IIGISIGSVE EALKGVKDGA
DYVAVSPVFS TGSKPDAGTG HGISCISAVR QAVEKDIPVL GIGGINCDNI PEVIKAGLDG
ICVISAVVSA PDITKAAEDL CQKIRSAKNE