| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1652 |
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| Symbol | |
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| ID | 4795905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanocorpusculum labreanum Z |
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| Kingdom | Archaea |
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| Replicon accession | NC_008942 |
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| Strand | - |
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| Start bp | 1680104 |
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| End bp | 1681525 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640100337 |
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| Product | hypothetical protein |
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| Protein accession | YP_001031080 |
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| Protein GI | 124486464 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase
[COG0710] 3-dehydroquinate dehydratase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase
[TIGR01093] 3-dehydroquinate dehydratase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00124545 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGCAA ATTGTGCCGT TATCGTGGCG AAAGATGAGA GAGAAGTTCG AACTCTTTCA
GAAGAAGCGA TCTCGAAAGG AGCAGAGGCT CTTGAATTCC GGCTGGATTC CTTCCCGGTT
ATTCCTGCAG ACCTCTCCTT TCTTTCATGC GGGGTTCCAT CAATAGCCAC ACTCAGATCT
CCGTTGGACG AAGAGCGGAA GGAGATTTTC ATCCGTGCTC TTTCGTCGGG CGCGACATAC
ATCGACATAG AATCAGATTC GGTTCTGAGA GGTCAGTTTC CAAAAGAACA GGTCATCTGT
TCGTATCATG ACTTTGAAAA AACTCCTGCC GATGATGAAA TTCTCACGAT CTTCAAAGAC
CTCCAATCTT CGGGAATCCC CAAAGCCGCA TTCATGGTGA GGGGGCCGGC GGATCTGCTT
GCCGTCTGGA ATGCAGCATC AGTTCTGAGA GAAAGAGGAT ATCCGTTTAT CTTTATAGGC
ATGGGGGCCG CCGGTGAGGT TACACGTATC CGTGCCGCCG AGCTTGGATC AATGCTCAAC
TACTGTGCCT TAAGGCCGGA ACTTGCATCC GCTCCGGGTC AGATAACACT GGAAGAGGCT
GAGAGACTCG GTACCGACCC GCAGATTACT GCCGTAACCG GATATCCTTT GACCCATACC
TTCTCGCCGG AGATCCACAA CGCAGCGTTC AAAGCCGCGA AGATCCGGGG AAGATATGTG
AAGATCCCCG CAGCTTCTCA GGAAGTGCCC CTGATTCCTG ATGTTATCAA AAAATATCGG
ATCATCGGGA TGAACGTAAC CATTCCTCAT AAAGAGTCGG TCATCCCTCT CCTGAAACGG
ATAGATCCTC TCGCGGAGTC TGCCGGCGCA GTGAACACTA TCCGAAATTC TCCCGCCGGC
CTTGAGGGGT ACAATACCGA TATTCTGGGA ATAGCGGCGT CGCTCGCTTC GGTGGATATG
GATCCAAAGG ATGCCGATGT GCTTATCATC GGTGCCGGAG GGGCAGCAAA GGCCGCCGCC
GCATATCTGA AATCTGCCGG TGCTCGTCTT TCGATAACCA ACAGGACCCA TTCCCGGGCA
GAGACACTTG CCGAAATATT TGGTGCCCGG GCAGTGAAGC TGGAGGACCT TGCTCCGGAG
TATCAGCTGA TTCTGAATGC GACCCCGGCT GGAATGAGCG GGTTTGAACA CTGCTCACCG
GTTCCAAATA CGCTATTCAC CAAAGACACG GTTGTTATGG ATATGATCTA TGATCCGGAA
GTGACTCCCC TTCTTGCCGC TGCAAAAGCA GCCGGCGTTC GTGCCTGCAT CAACGGAAAG
ACCATGCTTA TCGAACAGGC CGCCGCGTCA TTCACTCTCT GGACAGGAAT TACTCCGAAT
CGTGATGTGA TGAGAAAAGC ATTCGAAGCG AGGGCGGCAT GA
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| Protein sequence | MTANCAVIVA KDEREVRTLS EEAISKGAEA LEFRLDSFPV IPADLSFLSC GVPSIATLRS
PLDEERKEIF IRALSSGATY IDIESDSVLR GQFPKEQVIC SYHDFEKTPA DDEILTIFKD
LQSSGIPKAA FMVRGPADLL AVWNAASVLR ERGYPFIFIG MGAAGEVTRI RAAELGSMLN
YCALRPELAS APGQITLEEA ERLGTDPQIT AVTGYPLTHT FSPEIHNAAF KAAKIRGRYV
KIPAASQEVP LIPDVIKKYR IIGMNVTIPH KESVIPLLKR IDPLAESAGA VNTIRNSPAG
LEGYNTDILG IAASLASVDM DPKDADVLII GAGGAAKAAA AYLKSAGARL SITNRTHSRA
ETLAEIFGAR AVKLEDLAPE YQLILNATPA GMSGFEHCSP VPNTLFTKDT VVMDMIYDPE
VTPLLAAAKA AGVRACINGK TMLIEQAAAS FTLWTGITPN RDVMRKAFEA RAA
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