Gene Mlab_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1616 
Symbol 
ID4794468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1644864 
End bp1645271 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content51% 
IMG OID640100301 
Producthypothetical protein 
Protein accessionYP_001031045 
Protein GI124486429 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACCC GGATCTATAA AGAAACCCAC TTCGATGCAT CCCACCGTCT GATGCATTAC 
GAAGGCAAAT GTTCCAGGCT GCATGGTCAC CGCTGGAGTG TTGAGGTCTG GATGGATGGA
ACGCCCGACG AAAAATCACG GATCCTGCTT GATTACAATA TCATCAAAAA CATCATCAAC
GTCTACGATC ATCAGGTCGT TTTGAATAAA GACGATCCGA TGGTGGAGGC CCTTTCCCGA
TTCCAGACAC CGGTTCTTAC AAACGGCGAC CCGACAAGCG AACTTCTGGC AGAAGATATT
CGCGAACGGC TCAACACGTT CTGCAGAGAG CATGATCTGA GCGCCCGGGT CGCAAAACTG
CGGGTATGGG AGTCGGAAGG CTGCTATGCC GAGGTCTTTG CAGAATGA
 
Protein sequence
MVTRIYKETH FDASHRLMHY EGKCSRLHGH RWSVEVWMDG TPDEKSRILL DYNIIKNIIN 
VYDHQVVLNK DDPMVEALSR FQTPVLTNGD PTSELLAEDI RERLNTFCRE HDLSARVAKL
RVWESEGCYA EVFAE