Gene Mlab_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1586 
Symbol 
ID4794667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1617030 
End bp1618361 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content54% 
IMG OID640100272 
Producthypothetical protein 
Protein accessionYP_001031016 
Protein GI124486400 
COG category[S] Function unknown 
COG ID[COG1650] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000507896 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00416523 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTATTG ATATACTGAA CTCCGACTCG GACCCGGCCG GGCGAAATAT CCGGGCAGCT 
ATCGACGAAC TTTTGAAAAA TCCGCCGGAG GGGGGTTTCC CTCTTTTCGA CGGGAACGAG
GTGACGTTTC ACACTGTTTC AGGCCGGATC ATCCATGCGG AAAAATCCGC GGTGAACCCT
GATGCGGATC TGATCATTGT TGTTTCGCGT CATTCAAGTG TGAATCCGGT TCCTGTTCTG
ACGGTCCATC CGGCAGGGAA CTTCGGTATC GCGGGGCTTG GCGGCAACGA CCGGGAACTG
GGTCTGACGA GTCCTGCCTG GATGAAGTCG ATTCTGCAGA ACCACGCCGA GTTCGTTCCG
GAAGGGTACC GGGTCTCGTA CGAGATCACG CATCACGGGC CGACGGATTT TCCGGTCCCG
TTCTTTTTTG TCGAGGTGGG GAGTACGGAA AAAGAGTGGA ACGATCCCGC AGCCTGTATT
GCGGCGGCAA AAAGCGTTCT GTATGCCCGC CCTTCGCCGG AGATTGTCCC TCTGATCGGG
TTTGGCGGTA CGCATTATGC GGTCCGGCAG ACGGCGATCG GTCTCGAGAC GAAGGGAGCA
TTTGGGCATA TGATGCATAC CCGGGATGTC GGTTCGGTTT CCAAAGAGAT GGTGTCCCAG
ATGATCGCAA AATCGTGCGG GGTGTTTGCC GCGCATATCG ACCGGAAAGC TCTGTCAAAG
CAGGAGATCT CCCATATCGA AGGGATACTT GCTGAAGTCG GGCTGGAGGA GATCACCGAA
GGCGATCTGC GGAAAATGAA CGCGATGTCT TTTTCGACCT GGGTCGCCTA TCGCGATCTG
GCCGCTTTGC AGGCTCCCGG TCTGAAAATA TTCCCGCACG GCAGAATCTT TGACGGAGAC
CCGGCCGTGG TCGAACTTCC GTCTGATCTG TTTTCCGCAG CATTTCTCGG CTATGAGGAG
ATTTTCCTTG CTGAGCTGGA CAAAATGGGA AATATTTTTC ACACGACCGG AAAAGGCGGC
AGACTTATGC CGACTTTGCT GACTTCTGCA AAAAACAGGC AGAAGGTATC AGGTGATTTA
ATAGTCTTAT CCGTTCAACA AATAACACGT ACACAGGATA GTTTGGTGGA AGGTGATCAA
ATCACGATAG CCCGCCGGCA GTTCGACCCC GTGCTCGCGC GCACGCTCGG GGTCCCGTCA
GGTCCGTTAT ACGGGCAGCT TGTTGCCGGA AAACCCGTGA CTCTTCCCGA CGGCAGAATG
ATCACGCCGG ATATGGTCAC GAAAGTGGTC AGGACATCCA TCAAAATACC GGGATTGGAG
AATTACTCAT GA
 
Protein sequence
MIIDILNSDS DPAGRNIRAA IDELLKNPPE GGFPLFDGNE VTFHTVSGRI IHAEKSAVNP 
DADLIIVVSR HSSVNPVPVL TVHPAGNFGI AGLGGNDREL GLTSPAWMKS ILQNHAEFVP
EGYRVSYEIT HHGPTDFPVP FFFVEVGSTE KEWNDPAACI AAAKSVLYAR PSPEIVPLIG
FGGTHYAVRQ TAIGLETKGA FGHMMHTRDV GSVSKEMVSQ MIAKSCGVFA AHIDRKALSK
QEISHIEGIL AEVGLEEITE GDLRKMNAMS FSTWVAYRDL AALQAPGLKI FPHGRIFDGD
PAVVELPSDL FSAAFLGYEE IFLAELDKMG NIFHTTGKGG RLMPTLLTSA KNRQKVSGDL
IVLSVQQITR TQDSLVEGDQ ITIARRQFDP VLARTLGVPS GPLYGQLVAG KPVTLPDGRM
ITPDMVTKVV RTSIKIPGLE NYS