Gene Mlab_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1570 
Symbol 
ID4795376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1601983 
End bp1602561 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content47% 
IMG OID640100257 
Productchaperonin Cpn60/TCP-1 
Protein accessionYP_001031001 
Protein GI124486385 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1491] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0264604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCAA AAACTGAGAG GACCGATAAG AAGGAAGTTG AAGCTATAGT CCTTGACTAT 
CTCCAGTGGG GATATGCAAG CGACCGGCGT CCTTTGAATC AGCGCGAATC AATTATTCTC
GCAGTAGGTA CTGACCAGTT CAAACTCCTC GAACTCATCG CAAAGAAAGA CGTGGCGATC
AATCTGCACG ACAAAGTCTA CATCGGTGAA GATGAAAGAA AACATGTCGA ACGGGTAAAA
CGCCGGCTAT CTTACGATGA ACTGACTCCA ACTGCAAAAG GTGAACTGGA ACCGGTCGTC
GAGAAAATCA TCGCAGAGTC TGAAGGACGG TTCGTGGAGT TTTACAACAC CGCAGTCCCC
ATCAGCCTCA AGATGCACAT GTTAAATCTG CTTCCCGGAT TCGGTAAGAA AACACTGACC
GACACGCTGG AAGAAAGACA GAAAAAACCG TTTGAAAGTT TCGAAGACAT TCGTACCCGG
GTGAAGACCC TGCAGAAACC CGAGAAGTTT ATCCGCGAAC GGATCATGCT TGAACTCGAG
AATCCGGAAG AGAAGTATCA TCTCTTTACC TCAAAATAA
 
Protein sequence
MPPKTERTDK KEVEAIVLDY LQWGYASDRR PLNQRESIIL AVGTDQFKLL ELIAKKDVAI 
NLHDKVYIGE DERKHVERVK RRLSYDELTP TAKGELEPVV EKIIAESEGR FVEFYNTAVP
ISLKMHMLNL LPGFGKKTLT DTLEERQKKP FESFEDIRTR VKTLQKPEKF IRERIMLELE
NPEEKYHLFT SK