Gene Mlab_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1562 
Symbol 
ID4794698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1595698 
End bp1596462 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content56% 
IMG OID640100249 
Productmethyl-coenzyme M reductase, gamma subunit 
Protein accessionYP_001030993 
Protein GI124486377 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4057] Methyl coenzyme M reductase, gamma subunit 
TIGRFAM ID[TIGR03259] methyl-coenzyme M reductase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.494567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000366316 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATACA AACCACAGTA TGGTCCGGGA ACCTCCAAAG TTGCGGAAGT ACGTCGCAAC 
CAGATGAACC CGAACGTAAA GCTCGAAAAG ATTCGCAGCG TCACTGATGA GGACATCGTC
CTTATTATGG GACACCGTGC ACCAGGACAG GCATACCCGT CGGCACACCC CCCACTCGCA
GAGCAGGGAG AACCCGACTG CCCGATCCGC AAACTCGTTA AACCGACCGA AGGCGCAAAG
GCCGGTGACC GTGTCAGATA CATTCAGTTC GCTGACTCTA TGCTGAACGG CCCGTCCCAG
CCTTACCAGA GAACCTATCT CGAATGCTAC CGTTTCCGTG GTATCGACCC GGGAACTCTC
TCCGGCCGTC AGATCGTCGA GTGCCGCGAG CGTGACCTTG AAGGATACGC ACGTGAGCTT
ATCGAAACCT CTATCTTCGA CCCGGCAACC ACCGGTATCC GCGGTGCAAC CGTGCATGGA
CACTCCCTCC GTCTCGCAGA GAACGGTATG ATGTTCGATA TGCTCCAGCG TTGTATTCTC
GACACCGACG GTGTTGTCAA ATACATTAAA GACCAGGTCG GTGTCCCACT TGACCGCAAG
GTCGCTGTCG GTAAACCGAT GGACGCAGCC TGGCTGAAAG CGAACACCCC GATGTTCCAC
TCCCTTGTCG GAACTGCATT CCGCTCCGAC AGTGAATATG TTGCATACGT TCAGCGTATC
CACGCCCTCC GTACCAAATA CGGATTCATG CCCAAGGAGG CCTGA
 
Protein sequence
MAYKPQYGPG TSKVAEVRRN QMNPNVKLEK IRSVTDEDIV LIMGHRAPGQ AYPSAHPPLA 
EQGEPDCPIR KLVKPTEGAK AGDRVRYIQF ADSMLNGPSQ PYQRTYLECY RFRGIDPGTL
SGRQIVECRE RDLEGYAREL IETSIFDPAT TGIRGATVHG HSLRLAENGM MFDMLQRCIL
DTDGVVKYIK DQVGVPLDRK VAVGKPMDAA WLKANTPMFH SLVGTAFRSD SEYVAYVQRI
HALRTKYGFM PKEA