Gene Mlab_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1558 
Symbol 
ID4796067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1590929 
End bp1591774 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content51% 
IMG OID640100245 
Producttetrahydromethanopterin S-methyltransferase subunit C 
Protein accessionYP_001030989 
Protein GI124486373 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4061] Tetrahydromethanopterin S-methyltransferase, subunit C 
TIGRFAM ID[TIGR01148] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.123456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000156701 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGTAA AAGTTGAAGC ATCCCACGAC GGAATTCCAC ATGACAAGGT CATGGTCATC 
GGAGCCGTTA TTTCACTGGT ATCCCTTTAC ATCGCTATCA TTGGTACAGT CATCGGTGTT
GACTATCTCG CATTCTTTGG TGGATTTGCA GCAGTCGGCG CCCTGATCTG GGGTAACAGC
ACAATCAAAA AGCTCTGCAG CTATGGTATC GGAACTGGTG TTCCGTCTGC AGGTATGCTC
GCATTCGGAT CCGGTGTCAT TGCCCTTCTC TTTGCAGCTA CCCTTGGCGG AATCAGCATC
TGGATCGTAC CGGTTGCAGG ATTAATCATT GCTCTCATCG TCGGTCTCTT CCTTGGATGG
ATCTCAAACT CCGTTCTGAA CATGAAGATC CCGGTGATGA CCAGAAGTAT CGCAGAACTC
GCCGCAGTCG GCGCCCTTGC CCTTATGGGT CTTGGCGTTG TTGCAACCGG AACCGTTGGC
TTTACTGGAA TCGCCACCAT CGAGATCCTC GGTGTTACTG TTTACAATGC ATCCTATCTT
GGTGCAGGTG TTATTGCAGT TTCATTCATG CTCGGTGCAA TCGCTCTCCA GCACCCGTTC
AACGCGTGCC TCGGTCCAGG CGAGAAACAG GACAGAACCA ACATGCTCGC TATCGAATGC
GGTTTCCTTT CCATGATCAT CATGGCAGTG ATTTCCTTCG TTTTCGTTTC ATTAGCAGCA
GCTTGGATCT CACTTATCGT GGCCATCATT GGATGGTTCG TGTCCTATGT CAAATATCTC
GCCTTATCCA AGCGCGATGC AGCAGCCTGG CTTGATGCCA AGCCGTTCTC CGACGCGGAG
GAGTAA
 
Protein sequence
MSVKVEASHD GIPHDKVMVI GAVISLVSLY IAIIGTVIGV DYLAFFGGFA AVGALIWGNS 
TIKKLCSYGI GTGVPSAGML AFGSGVIALL FAATLGGISI WIVPVAGLII ALIVGLFLGW
ISNSVLNMKI PVMTRSIAEL AAVGALALMG LGVVATGTVG FTGIATIEIL GVTVYNASYL
GAGVIAVSFM LGAIALQHPF NACLGPGEKQ DRTNMLAIEC GFLSMIIMAV ISFVFVSLAA
AWISLIVAII GWFVSYVKYL ALSKRDAAAW LDAKPFSDAE E