Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1558 |
Symbol | |
ID | 4796067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 1590929 |
End bp | 1591774 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640100245 |
Product | tetrahydromethanopterin S-methyltransferase subunit C |
Protein accession | YP_001030989 |
Protein GI | 124486373 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4061] Tetrahydromethanopterin S-methyltransferase, subunit C |
TIGRFAM ID | [TIGR01148] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.123456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000156701 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGTAA AAGTTGAAGC ATCCCACGAC GGAATTCCAC ATGACAAGGT CATGGTCATC GGAGCCGTTA TTTCACTGGT ATCCCTTTAC ATCGCTATCA TTGGTACAGT CATCGGTGTT GACTATCTCG CATTCTTTGG TGGATTTGCA GCAGTCGGCG CCCTGATCTG GGGTAACAGC ACAATCAAAA AGCTCTGCAG CTATGGTATC GGAACTGGTG TTCCGTCTGC AGGTATGCTC GCATTCGGAT CCGGTGTCAT TGCCCTTCTC TTTGCAGCTA CCCTTGGCGG AATCAGCATC TGGATCGTAC CGGTTGCAGG ATTAATCATT GCTCTCATCG TCGGTCTCTT CCTTGGATGG ATCTCAAACT CCGTTCTGAA CATGAAGATC CCGGTGATGA CCAGAAGTAT CGCAGAACTC GCCGCAGTCG GCGCCCTTGC CCTTATGGGT CTTGGCGTTG TTGCAACCGG AACCGTTGGC TTTACTGGAA TCGCCACCAT CGAGATCCTC GGTGTTACTG TTTACAATGC ATCCTATCTT GGTGCAGGTG TTATTGCAGT TTCATTCATG CTCGGTGCAA TCGCTCTCCA GCACCCGTTC AACGCGTGCC TCGGTCCAGG CGAGAAACAG GACAGAACCA ACATGCTCGC TATCGAATGC GGTTTCCTTT CCATGATCAT CATGGCAGTG ATTTCCTTCG TTTTCGTTTC ATTAGCAGCA GCTTGGATCT CACTTATCGT GGCCATCATT GGATGGTTCG TGTCCTATGT CAAATATCTC GCCTTATCCA AGCGCGATGC AGCAGCCTGG CTTGATGCCA AGCCGTTCTC CGACGCGGAG GAGTAA
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Protein sequence | MSVKVEASHD GIPHDKVMVI GAVISLVSLY IAIIGTVIGV DYLAFFGGFA AVGALIWGNS TIKKLCSYGI GTGVPSAGML AFGSGVIALL FAATLGGISI WIVPVAGLII ALIVGLFLGW ISNSVLNMKI PVMTRSIAEL AAVGALALMG LGVVATGTVG FTGIATIEIL GVTVYNASYL GAGVIAVSFM LGAIALQHPF NACLGPGEKQ DRTNMLAIEC GFLSMIIMAV ISFVFVSLAA AWISLIVAII GWFVSYVKYL ALSKRDAAAW LDAKPFSDAE E
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