Gene Mlab_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1553 
Symbol 
ID4796050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1587903 
End bp1588922 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content52% 
IMG OID640100240 
Producttetrahydromethanopterin S-methyltransferase subunit H 
Protein accessionYP_001030984 
Protein GI124486368 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1962] Tetrahydromethanopterin S-methyltransferase, subunit H 
TIGRFAM ID[TIGR01114] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H
[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.237238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000220711 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCAAGT TTGAAAAAGA ACAGCAGGTC TTTGACTTTA ATGGAACGAA GATCGGTGGA 
CAGCCCGGAG AGTATCCGCG TGTGCTTTCA CCCTCCATCT TCTACAACAA ACACGAGATC
GTTTTAAACG ATCACACCGG TGAGATTGAC AAAGCAAAAG CAGAAGCACT CTGGAACCGC
TGTCAGGAAC TTTCTGACAT TACCGGCAAC AAGTACTTCC TCCAGATTCT CGCAGAACAC
GGCGAGGCTT TCGAGTCATA CTTCTCCTGG TTCGACAGTA TCGACAACAA GACCGCATTC
CTGATGGACT CCTCTGCTCC TGCAGCACTT GTCCACGCAA CGAAATACGT TACGGAAGTC
GGTCTTGCAG ACCGCGCTAT CTACAACTCG ATCAACGGTT CAATCCTTCC GGAGAACGTT
CAGGCACTTG CAGAGTCCGA TGTGAACTCC GCAATCGTTC TGGCATTCAA CCCAGGTGAC
TCATCCGTTG CCGGACGTGA GAAAGCACTC GTCGACGGTG GTGTTGCAGG TCAGGCAAAA
GGTATGCTTC AGATCGCAGA AGAATGCGGT ATCACCCGCC CGATTCTCGA CACTGCAGCA
ACTCCCCTTG GTCTCGGCTC ATTCGGTTCC TACCGTGAAA TCCTTGCATG CAAGGCAATC
CACGGTATGC CTACCGGTGG TGCATACCAC AACATGACTG TGTCCTGGAC CTGGCTGAAA
CGCTGGAGAA AGAACATCCA CGAGCAGTAC GCAGACAAGC CGCTCCTTGC AGAGCAGATG
TTCCACCACC ACTACGGCGG CATCGAAGGC GTCCGTCAGG CTGCATGGTC TTCACCGGAT
ATCGGCTGTA ACATTATGGC AATGACCCTT GGTGCAGACT TAATCATGTA CGGCCCAATC
GAGAACATGG AAGGTGCCGC AACTGCAACA GCATTCTCCG ATATCGTTCT TGCCGAAGCT
TTCAGAGACT TCGGTGGAAC CATCGGTGTT GAAGACGGTC CGATCAACAA ACTCGTATAA
 
Protein sequence
MFKFEKEQQV FDFNGTKIGG QPGEYPRVLS PSIFYNKHEI VLNDHTGEID KAKAEALWNR 
CQELSDITGN KYFLQILAEH GEAFESYFSW FDSIDNKTAF LMDSSAPAAL VHATKYVTEV
GLADRAIYNS INGSILPENV QALAESDVNS AIVLAFNPGD SSVAGREKAL VDGGVAGQAK
GMLQIAEECG ITRPILDTAA TPLGLGSFGS YREILACKAI HGMPTGGAYH NMTVSWTWLK
RWRKNIHEQY ADKPLLAEQM FHHHYGGIEG VRQAAWSSPD IGCNIMAMTL GADLIMYGPI
ENMEGAATAT AFSDIVLAEA FRDFGGTIGV EDGPINKLV