Gene Mlab_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1550 
Symbol 
ID4794630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1584853 
End bp1585170 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content45% 
IMG OID640100237 
Producttranslation initiation factor IF-1A 
Protein accessionYP_001030981 
Protein GI124486365 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00523] eukaryotic/archaeal initiation factor 1A 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.812328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000482872 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGGGAAGAA TAGAGAACGA CAATCAGGAC GTATCAGATG ACGGCAGCAT TATTCGTGTA 
AAACTGCCGA ATAAACGTAT ACGAGAACAA TTTGCACAGG CAGAACTGAT GCTTGGATCA
AACCACATCA GAGTACGATG CTCAGACGGC GTAACGCGCC TTGGGCGCAT TAAGGGTAAA
ATCAAGAAAC GGGTTTGGAT TCGTGAAGGT GATATCCTTA TTGTTGTTCC CTGGGATTTC
CAGGATGATA AATGCGATAT TATCTATCGA TACACTACCC CTCAGGTAGA CTGGCTTCGC
GCCCACAAAT ATCTCTAA
 
Protein sequence
MGRIENDNQD VSDDGSIIRV KLPNKRIREQ FAQAELMLGS NHIRVRCSDG VTRLGRIKGK 
IKKRVWIREG DILIVVPWDF QDDKCDIIYR YTTPQVDWLR AHKYL