Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1548 |
Symbol | |
ID | 4796028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 1583219 |
End bp | 1584079 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640100235 |
Product | hypothetical protein |
Protein accession | YP_001030979 |
Protein GI | 124486363 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.626494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00000786067 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCTGACG CAATTTGTGT GCATGAATTA TGTAAGGAAT ATCCCGACTT CTCCCTGCAG AACGTTTCAT TTTGTCTGCC TAAAGGAAGC ATAATGGGAT TTATCGGGGA AAACGGAGCC GGAAAAACAA CAACAATAAA AACGATGCTT GGGATCGCCA AAAAAACCAG CGGCTCAGTA AAACTGTTCG GGCTGGATCT TGCGGATCAC GAAAAGGAGA TCAAGAACCG GATCGGTGTC GTCTTCGATG AATGCAGTTT TCACGACACG CTCACCGCGC TTGATGTGGC GAAGATCCTT GGGAAAATCT ATGCGGATTG GGATGATCCA CTCTATATCA AATATCTCAA ACAGTTTGAT CTCCCGGAAA AGAAAAAGAT CAAAGAGTAC TCCCGGGGCA TGAAAATGAA GCTTGGGATC GCAGCGGCTC TTTCCCATCA CCCGGATCTG CTGATCCTTG ATGAACCGAC CAGCGGACTC GATCCGGTCA TCCGTGAAGA GATACTGGAT ATCTTCCTTG AATTTATTCA GGATGAGGAG CACTCGATCC TTCTTTCCTC GCACATCACA AGCGATCTCG ACAAAATCGC CGATTACCTT ACCTTTATCC ATGAGGGAAA GATCGTGCTT TCCAAATCCA AAGACGAGAT CCTGGAAGAT CTGGGTATTC TGAAATGCAG TCTCGAGGAG TTTGGTGCCC TTGACAAAAC ATCATTTATC ACCTACCGAA AGAATCAGTT TGGCTGTGAG GTGCTGATCA AAGACAAAAT GAACTTCATT TCACGGCACC CGGATATGAT CGTAGATCCT GTTTCGACGG AATCGGTTAT GGTGTTTTAT GCAAGGGGGA AAACCGTATG A
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Protein sequence | MSDAICVHEL CKEYPDFSLQ NVSFCLPKGS IMGFIGENGA GKTTTIKTML GIAKKTSGSV KLFGLDLADH EKEIKNRIGV VFDECSFHDT LTALDVAKIL GKIYADWDDP LYIKYLKQFD LPEKKKIKEY SRGMKMKLGI AAALSHHPDL LILDEPTSGL DPVIREEILD IFLEFIQDEE HSILLSSHIT SDLDKIADYL TFIHEGKIVL SKSKDEILED LGILKCSLEE FGALDKTSFI TYRKNQFGCE VLIKDKMNFI SRHPDMIVDP VSTESVMVFY ARGKTV
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