Gene Mlab_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1537 
Symbol 
ID4794972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1570170 
End bp1571921 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content47% 
IMG OID640100223 
Productaminoacyl-tRNA hydrolase 
Protein accessionYP_001030968 
Protein GI124486352 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.20083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0017261 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTCTTC CCTCATTCAA AAAAACGGAT GAAACAACTA CCGTACTTTC TGTGACGAAA 
GATGATGAGT CCGCAGTTAT CAAAGAGATC TTCTCGGAAA ATATGACGAG TTCAGCAGAA
AAAAACCAAG CCCCCATGAA CATAAAGAAA GAGGGAAAAA AACCATCTGC ACGTTTGAAG
AAGACAAAAA ACCACAAAAA ATCTGCCGAA GCGAAAGAAA CCACCTTCAG CATCAAATCT
CTTCTGTCTG GAAAACCTGA ACAAAAGACC GTCTTTGAAG AGCCGCCGCA GGTTCTCCAC
CTGCCGCCGT TTGAAACTGA ATTTGAAATC CTCGACAGAT ACTGGCTCAC CCCGCCGTAT
GCATATGCCA ACATTTACCG TGATGAATAC GACAATGTCC ATTACCAGAT GGTAGAGCCG
AAACTCAATG AAAAAGAACT CGTTGTCTTA GAGGAAACGT TCGAACATCT CAGGAGCATG
CTTGTCTACG ACACGGTGCG AAAACGCGGT GAGCTTGAAC TTGACCCGTA CCTTCTTAGG
GAAGTCATAA CCAACTTTGA CCCGGACATA ACGCCGGAAA GGCGCGACAC GCTCATTTAT
TATCTCAACA GAAACTTTCT GGGATACGGC AAACTCGACC CCCTTATGCA TGATGAAAAA
ATCGAAGATA TCACCTGTAA TGGTGCAGAC ATTCCTATCT TCCTCTATCA CAGAAGATTT
GCCAACGTTG AAACCGACAT TCTTTTTGAC TCGACCGAAC TGAACAAATA CGTTTTGAAA
CTTGCTCAGA GAGGAGACAA ACAGCTGTCC TTAACATCGC CGATCATTGA TGCAGCGCTG
CCGGAAGGTT CGCGTGTCCA GTTGACCTAC TCTGACATCA TTTCGTCCAA AGGAAGTTCC
TTTACCGTCA GAAAATTCAA AGCCGAACCA ATGACCCCGG CGGATCTCGT CGTCTCGAAT
ACCTACAGCA GTGAACTCAT GGCACACCTC TGGCTCGCTG TAGAAAACAG AAAAAGTATG
ATTATTGCCG GCGGAACGGC CAGTGGTAAA ACCTCGACGA TGAATGCAGC GTCGTTTTTT
ATTCCGGCGG TTGCCAAAAT CGTCTCAATC GAAGATACCC GGGAAATTCA GCTGCCCCAT
GTCAACTGGC TCCCGATGAA AACGCGTGAG AGTGCCGCAA ATATTTCCGG TGTTGGAAAC
GTCAGTATGT TCTCCCTGTT AAAAGCTGCA CTTAGACAAA GACCTGAGTA CATCATTGTC
GGAGAGGTCA GGGGCGAAGA AGCCCAGACA TTATTTCAGG CAATGAACAC CGGACATACA
ACCTACTCAA CCCTGCATGC CGGAAACGTC AAAGAGGCGA TTAACCGGCT CGTAAATGAT
CCAATTAATG TGCCCGCGGC AATGTTTGGC GCACTTAATC TTGTCGTCAT TCAAAGTCTG
CTCTACGGAG AAGGAAAAGG GTTCAGGCGC TGTTTATCCT TAAACGAGAT CATGGTCAAT
GATGATACAA TTGCATGGAC ACCCCTGTTT CAGTGGAACC ACACAACGGA CCGGTTTGAT
AAAGTTTATA CCCGTTCCGC AGTTTTCGAC AGCATTGCCT ATCAGAACGG CTGGACCGAT
GAACAGATGC AGGAGAGAAT CAACAGCAAA ATACAAGCTC TCGATGAGAT GGCGGCTTCG
GGAAAAACCA ACCCGGATGC AGTGGAAAAA GCAATAATTG AGACGATTCT GCGCGAACGA
AAGCAATCCT GA
 
Protein sequence
MRLPSFKKTD ETTTVLSVTK DDESAVIKEI FSENMTSSAE KNQAPMNIKK EGKKPSARLK 
KTKNHKKSAE AKETTFSIKS LLSGKPEQKT VFEEPPQVLH LPPFETEFEI LDRYWLTPPY
AYANIYRDEY DNVHYQMVEP KLNEKELVVL EETFEHLRSM LVYDTVRKRG ELELDPYLLR
EVITNFDPDI TPERRDTLIY YLNRNFLGYG KLDPLMHDEK IEDITCNGAD IPIFLYHRRF
ANVETDILFD STELNKYVLK LAQRGDKQLS LTSPIIDAAL PEGSRVQLTY SDIISSKGSS
FTVRKFKAEP MTPADLVVSN TYSSELMAHL WLAVENRKSM IIAGGTASGK TSTMNAASFF
IPAVAKIVSI EDTREIQLPH VNWLPMKTRE SAANISGVGN VSMFSLLKAA LRQRPEYIIV
GEVRGEEAQT LFQAMNTGHT TYSTLHAGNV KEAINRLVND PINVPAAMFG ALNLVVIQSL
LYGEGKGFRR CLSLNEIMVN DDTIAWTPLF QWNHTTDRFD KVYTRSAVFD SIAYQNGWTD
EQMQERINSK IQALDEMAAS GKTNPDAVEK AIIETILRER KQS