Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1533 |
Symbol | |
ID | 4795732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | - |
Start bp | 1564401 |
End bp | 1565078 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640100219 |
Product | hypothetical protein |
Protein accession | YP_001030964 |
Protein GI | 124486348 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02537] archaeal flagellin N-terminal-like domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000114836 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0155264 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTCTA AAAACAAGGA ATCTGGGGTC TCCCCGGTTG TCGGCGTTAT GCTGATGCTG GTTGTAACGA TTATTATTGC AGCAGTTGTG GGAATGGTTG CAGCCAACTA TGTAGGAAGT ACGGAGGCAT CGCCGATGAC AAGGATCAAC TACCTTGGTT CTGTTCAGGG AAATGATTTT GAAAACGGCT TTTTAGGCGA AGTCGGTCTT CTTTTTGAAA ATATCGGTGG TGAAAACATT GTTCTGACAA ATCTGGAGCT CACTCTGCAG GAAAATACCC GTGGTGTTGT GAATGAAACG ACAATTACGT TTAATGACGC CCCCTCAACC GCGATTTCCG GCATCCTGAC ACCCGGAGAA GCCCGTCTGT CTATTACACC ATCAGCCAAA AAGGTTGACT ACCGGATGAA AAAGGTAGGC GTCACCATGA AATACGGGAC GTATCTTGCT TATCAGACCA TTGAGCCGGG AGAACGTTTC ATCATTTATA CCGACCGGAT TATCCAGAGT GACACATCAA AGTATAGTCA GCTCTACATG GCCGCAACGA GAGACGGCAC ATACTCGGAA GGATTTTTCG AGATTGGTCC GGGAACGGTT TACACACTTA AAGATACATC AACGGGCAAT GTAATTGCAT CGGGTGATCT GTCCGGAAAG GTGTATGATT ATATCTGA
|
Protein sequence | MKSKNKESGV SPVVGVMLML VVTIIIAAVV GMVAANYVGS TEASPMTRIN YLGSVQGNDF ENGFLGEVGL LFENIGGENI VLTNLELTLQ ENTRGVVNET TITFNDAPST AISGILTPGE ARLSITPSAK KVDYRMKKVG VTMKYGTYLA YQTIEPGERF IIYTDRIIQS DTSKYSQLYM AATRDGTYSE GFFEIGPGTV YTLKDTSTGN VIASGDLSGK VYDYI
|
| |