| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1526 |
|---|
| Symbol | |
|---|
| ID | 4794516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1558951 |
|---|
| End bp | 1559499 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640100212 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001030957 |
|---|
| Protein GI | 124486341 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1418] Predicted HD superfamily hydrolase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0431553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0979623 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCCAT ATAACGCCAA CCCAATTTGT GACAATATAA TCATGATGAA TACCCCCATT
CAGGATAACG AAACTGTCCT GCAGCAGATC CTCTCCTCAT GCGAGGCTTC CCGTCTGCTT
GAAACAAAGC AGTTTATGCA GCACGGTGAC ACGAACGTTT ATGAGCACTG CATCGCTGTG
GCGCGGGTCA GTTGTCTGCT TGCGGATAAG ATGGGCTTAT CGGTTGATCG GGAATCCCTT
ATCCGGGGTG CCCTGCTTCA CGATTATTTC TTTTATGACT GGCATGTTCC GGATCCCGGG
CACCGCCTGC ATGGATTCAC CCATCCCAAG CGTGCTTTGC AGAATGCGAT GGATGATTTT
GCCTTGACCA CGGTCGAACA GGATATGATT CTTCGCCATA TGTTTCCTTT GACGCCGACT
CCTCCAAGGT TCCGGGAGGG CTGGCTCCTG TGTCTTGCGG ATAAATTCTG TTCGACTTTG
GAAACAGCAC GGTTTACCCA AAATTCGTTT GTAAGAGGAT TTTATGCGAG CGAGGGTGAG
ATGCAGTGA
|
|---|
| Protein sequence | MQPYNANPIC DNIIMMNTPI QDNETVLQQI LSSCEASRLL ETKQFMQHGD TNVYEHCIAV
ARVSCLLADK MGLSVDRESL IRGALLHDYF FYDWHVPDPG HRLHGFTHPK RALQNAMDDF
ALTTVEQDMI LRHMFPLTPT PPRFREGWLL CLADKFCSTL ETARFTQNSF VRGFYASEGE
MQ
|
|---|
| |