Gene Mlab_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1521 
Symbol 
ID4795939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1554132 
End bp1554623 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content50% 
IMG OID640100207 
Producthypothetical protein 
Protein accessionYP_001030952 
Protein GI124486336 
COG category[T] Signal transduction mechanisms 
COG ID[COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0975957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.473043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAA AAATCTCTTC CCGTACGGTA TATCTGATGA TTGGCTTTGC CGTACTCTCT 
CTTCTTGCCG GATTTTTGGG CACAATCGTT ACGATCACCG GTCCTGATTC CTGGTTCGCT
CTTGAACTGA TCAAACCGGC CTGGCAGCCG CCGAACTTTC TGTTTGCTCC GGTGTGGACC
ACGCTCTATA TCCTGATGGG TAGCGCCGCC GGTCTGGTTT TCGCACAGGG CTGGGAGAAA
AAAGAGGTTA AGATCGCTAC CGTCGTATTT TTGATCCAGC TCGCCCTCAA TGTCCTGTGG
TCGTATATGT TCTTCGGCTG GCACCTGCTT TTAGGATCGA CGATCGAGAT CATTGTGCTT
TGGATAATGA TCTGCGTAAC GATGTATCTT TTCTACAAAG TCAAGCCAGC TGCCGCCTAT
CTGCTGATCC CGTATATCCT TTGGGTGACT TTTGCAACAG TGCTGACCGC CACCATCTGG
ATGATCAACT AG
 
Protein sequence
MNAKISSRTV YLMIGFAVLS LLAGFLGTIV TITGPDSWFA LELIKPAWQP PNFLFAPVWT 
TLYILMGSAA GLVFAQGWEK KEVKIATVVF LIQLALNVLW SYMFFGWHLL LGSTIEIIVL
WIMICVTMYL FYKVKPAAAY LLIPYILWVT FATVLTATIW MIN