Gene Mlab_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1500 
Symbolndk 
ID4794780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1533899 
End bp1534348 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content50% 
IMG OID640100184 
Productnucleoside diphosphate kinase 
Protein accessionYP_001030931 
Protein GI124486315 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.184846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCA CCTTTGTGAT GATCAAACCC GACGGTGTTC AGCGCGGTCT CGTCGGTGAG 
ATTCTCTCCC GCTTTGAAAA CAAGGGATTC AAGATCGTTG CCGGTAAATT CGGTGTTCTT
GCAGAATCCA TTGTCGACAA GCACTACGAG GAACACCTCG CAAAACCCTT CTACCCGGGT
ATGAAAGCAT ACATTACGAG TGGACCGGTA TTCCGCTTTG TCCTCGAAGG TGACAATGTT
GTTGCAACAG TTCGGAAAAT GAACGGTGCA ACCAACCCGA CAGAAGCTAA CCCCGGTACC
ATCCGCGGCG ATTATGCTCT GTCCATCGGC AAAAATGTCA TTCATGCAGC AGACTCTCCC
GAGAGTGCAG CCCGTGAGAT CGGCATTCAC TTTACTCCTG CCGAACTCGT ATCTTATACT
AAGATCGACG AGTCCGAGCT TTACGAGTAA
 
Protein sequence
MERTFVMIKP DGVQRGLVGE ILSRFENKGF KIVAGKFGVL AESIVDKHYE EHLAKPFYPG 
MKAYITSGPV FRFVLEGDNV VATVRKMNGA TNPTEANPGT IRGDYALSIG KNVIHAADSP
ESAAREIGIH FTPAELVSYT KIDESELYE