| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1457 |
|---|
| Symbol | |
|---|
| ID | 4795742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1490873 |
|---|
| End bp | 1492159 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640100142 |
|---|
| Product | phenylacetate-CoA ligase |
|---|
| Protein accession | YP_001030889 |
|---|
| Protein GI | 124486273 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.387558 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTGGA ATGAGAAGAT GGAAACCCTG TCCGGCCAGG CTCTTGAAGA GCTTCAGCTC
AAACGTCTCA AGGAGACGGT TGCACGGACG CAGAATATCG GTTTCTACAA TACCCTGTTC
AAAGATGCGG GAATAACCCC GTCTGATATT AAATCACTAG ATGATCTGGC AAAGATTCCG
TTCACGAAGA AAGCGGATCT CCGTGGGGGA TATCCGTTTG GCTTTTTAGC GGTGCCAATG
AATCAGGTCA ACCGTATTCA TACAACATCC GGAACGACCG GGAAACCGAC GGTCGTTGCC
TATACGAAAA ACGATCTCAA TATGTGGTCG GAACTTATCG CACGGAACCT GACGATGGTG
GGGCTTAGAG CCGGCGATAT TTTCCAGAAT GCATCGAACT ACTCTCTTTT TACCGGCGGG
CTCGGCATCC ATATGGGGGC TGAGAAGATC GGCTGCGCTG TTGTGCCGTC AGGCGTCGGC
AATACAAAAC GGCAGATCGA GATGATCCAG GATTTCAAGG TCAAGGGTCT TCACTGCACG
CCGAGCTATG CGATGCATCT GACCGAGGTG GCTGAGGAAA TGCATGCGGA TCTTGCTTCG
CTTGAGATCG GCTGTTTTGG TGCGGAAGCC TGGTCGGAGA ATATGCGCCG CGATCTGGAG
AACCGTCTCG GTCTCAAGGC CTACGACAGT TACGGGATGA GTGAACTTTT CGGTCCGGGC
GTTGCCTTTG AATGCCCCGA ACAGGACGGT CTGCATATCT GGCACGACTG TTATATCGTC
GAGATCATCG ATCCTAAGAC CGGCGAGGTG CTCGGTCCCG AAGAGAAGGG AGAAATGGTC
GTGACCCCGA TCGTGAAGGA GGCCATGCCT CTCTTAAGAT ACAGGACCGG CGATATCACG
ATGCTCATGG AGGATGAGTG TCCGTGCGGC CGTGGTCAGA AGATCGCAAG ACTGCTTGGA
AGAAGCGATG ATATGCTGAC GGTCCGTGGG ATCAATGTTT TCCCGAGTCA GATCGAGCAT
GTACTGAAAA ACATCCCCGA AGTGGGCGAT CAGTTCATAG TCTACATCGA TCGGGTGAAC
CATCTTGATG AGATGATGAT CGAGGTGGAG ATGAATAAAA ACATCTTCTC GGGAGAACTT
CAGGATCTCT CGAAGCTGCA GACGAAGATC ATGAAGGCCC TGCAGGACAC GCTTACGCTG
CGTGCCAGAG TCGAGCTTGT AGAGCCGGGG TCTCTCCCCC GCTTTGAAGG GAAAGCAAAG
AGAGTCGTTG ACCGGAGGGT CATTTAA
|
|---|
| Protein sequence | MFWNEKMETL SGQALEELQL KRLKETVART QNIGFYNTLF KDAGITPSDI KSLDDLAKIP
FTKKADLRGG YPFGFLAVPM NQVNRIHTTS GTTGKPTVVA YTKNDLNMWS ELIARNLTMV
GLRAGDIFQN ASNYSLFTGG LGIHMGAEKI GCAVVPSGVG NTKRQIEMIQ DFKVKGLHCT
PSYAMHLTEV AEEMHADLAS LEIGCFGAEA WSENMRRDLE NRLGLKAYDS YGMSELFGPG
VAFECPEQDG LHIWHDCYIV EIIDPKTGEV LGPEEKGEMV VTPIVKEAMP LLRYRTGDIT
MLMEDECPCG RGQKIARLLG RSDDMLTVRG INVFPSQIEH VLKNIPEVGD QFIVYIDRVN
HLDEMMIEVE MNKNIFSGEL QDLSKLQTKI MKALQDTLTL RARVELVEPG SLPRFEGKAK
RVVDRRVI
|
|---|
| |