Gene Mlab_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1450 
Symbol 
ID4794423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1481475 
End bp1482893 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content45% 
IMG OID640100135 
Producthypothetical protein 
Protein accessionYP_001030882 
Protein GI124486266 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCATGA TTGCCCTCGT CTGGATTTTT TGTGCGGTCA TGGTGAATCT GACCCTGACA 
CGAAAATACT CCGGTCTGCA CACAGCATTA CTCTGGATTG GAGGATTCCT GACGCTGGTC
GTTCTCACCT CTTTTGTGGA TGTTGTCTAC GAGGCGTGTG TCTTTCTTAT ACCAAGCGGA
TATGATTTTA TTTCTTTACT TGCCGACTGT CTGTTTGTGA CCGTCGTCGG TGTCTGGTTT
GTTTTTGTAT CCTGGAAGAT GTACCGGGGA ACCTCATCTT CCAAGCTCTT TATAGCATCT
TATATTCTTT TTATCGGCTT AAGCATCTGT GACCTTTCTT TTAGCATCAT TCACATGATG
TTCCCATGGG ATCTCTATCA GCTGAAGTTT GCAGCCTGCA TTCTGATTTT GATCGCTCTG
ACCATTGGTC TGATGCTGGT GAGTCGTTTC CAGATCAAAA CAATCCAGGA AACAAACAGA
GACCTGCAGG GGGATTTTCG AGATGTTCTC TTCATTCCTA TCGCGGTCTA TCTGGCCTAT
GCCGTACTAT CCTGTCTGTG GAATAGTCAG GAAGGAACCG TATTTTTCAT TCCGGAGATC
ACCACCAGAA TCATTTTCAT CATCATGGTT ATCCTGCTCT ATATGCAGGT TTTTTACGGG
ATACATAAGG CCATCAAGCA GATCCATATC GATGAAGAGA TGCGCCTTGC AAAGGATGTA
CAGTCCAGCA TACTTCCGGA TCCGGATTTA TTCGAAAACA TCACCGGTGT AACAATACAC
GCAGCCATCT CTGAATCAGA ACTGGTCGGC GGAGACTTCT ATGATATTAT CAGAATCGGG
GACTATCATC TTGCGATTGT CATCGCCGAT GTATCGGGCA AGGGGATTTC CGCAGCACTC
ATGATGATGC GTGTCAAAAC CATGATCAAA ATATCAGTGC GGACATTATT CACGCAGCCC
GGCAGAATGC TGACGATCGT TAATCGAGAA ATCATGAAAA ATAATGACGC ATGCAGGTTC
GTCACGGTTT TTCTCGGGAT ACTCAACATA AAAAGTGGTC GTTTTACCTA CGCATGTGCC
GGACACAATC CGCCGATACT TTGCAGAGCA GGAATCTGCA CCCTGGTTGT ATGCGAGAAA
GCACCCGGAC TTGGAATCAT GGACCACGAA TATATCGATC AGCGAACTGT TCTGAAGCGA
AATGATACGC TATGTATGTA CACCGACGGA GTAACGGAGG CGCAAAACAA ACATGGCGAA
ATGTATGGAG TGTACCGGCT CCTTTCGATC GTTGAAAAAT CAGACGATCC AAAAACTATG
ATTAATTCAG TAATCGATGA TGTAAACGTT TTCACCGGGA ACCGTGGACA GACGGACGAT
ATGACGATGC TCGCTGTCAG ATACACCCAA GAAGAATAA
 
Protein sequence
MCMIALVWIF CAVMVNLTLT RKYSGLHTAL LWIGGFLTLV VLTSFVDVVY EACVFLIPSG 
YDFISLLADC LFVTVVGVWF VFVSWKMYRG TSSSKLFIAS YILFIGLSIC DLSFSIIHMM
FPWDLYQLKF AACILILIAL TIGLMLVSRF QIKTIQETNR DLQGDFRDVL FIPIAVYLAY
AVLSCLWNSQ EGTVFFIPEI TTRIIFIIMV ILLYMQVFYG IHKAIKQIHI DEEMRLAKDV
QSSILPDPDL FENITGVTIH AAISESELVG GDFYDIIRIG DYHLAIVIAD VSGKGISAAL
MMMRVKTMIK ISVRTLFTQP GRMLTIVNRE IMKNNDACRF VTVFLGILNI KSGRFTYACA
GHNPPILCRA GICTLVVCEK APGLGIMDHE YIDQRTVLKR NDTLCMYTDG VTEAQNKHGE
MYGVYRLLSI VEKSDDPKTM INSVIDDVNV FTGNRGQTDD MTMLAVRYTQ EE