Gene Mlab_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1420 
Symbol 
ID4796090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1449456 
End bp1450655 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content51% 
IMG OID640100106 
Productthreonine synthase 
Protein accessionYP_001030853 
Protein GI124486237 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.673193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAC TCGTCTGTGT ACACTGCGGC GCTGAGTATC CGCCTGACGC CATTGTGTAT 
AATTGTGAGA AATGCGGCCA CCTGCTTGCA GTTAAGTATG ATCTGAGCAA GATCACGATT
ACTCACGAAG AAATATTACA GCGTCCTATC TCCCTCTGGC GCTACAAAGA GTTCCTTCCA
GTCCAGATTG AGCCGGTCAC CCTTCAGGAA GGAGGTACGC CTTTGTATCA CCTGAAAAGA
CTTGGGGAAG AGCTGGGTCT GACCAATCTG TATGCAAAGC ACGAGGGTAT GAACCCGTCA
GGATCATTCA AAGACCGCGG TATGACCCTT GGTGTTTCTA TGGCAAAACA GCTCGGCAAA
AATATCGTTG CCTGCGCGTC CACTGGAAAT ACCTCGGCAT CGATGGCGGT TTATGCAGCA
AAAGCAAATA TGCCGGCAGT TGTTTTACTG CCCGCCGGCC ATGTTGCTCT TGGCAAAGTT
GCCCAGGCAC TTATGCATGG AGCAAAGGTC ATTTCGATTC GGGGTAACTT TGACCGCGCC
CTTGAGATGG TGCATGAACT CTGTATTTCC CATGGAATTT ATCTCTTAAA CTCCATCAAC
CCATATCGTC TTGAAGGACA GAAAACGATT GGGTTCGAAG TAGTCGATCA GCTTGGCTGC
GTTCCGGACA GAATTGTTCT GCCGGTAGGA AATGCCGGAA ACATATCTGC CGTCTACAAA
GGATTATGCG AGTGGAAAGA GATCGGATAC ATTGACCGCC TTCCAAAAAT GACAGCAATT
CAGGCCGAGG GCGCGGCTCC AGTCGTAGCC GCAATCAAAG GTCAGCTTCC GGAAGTTGTT
GTTGAGCAGA ACCCTGAAAC GGTTGCCTCC GCAATTCGTA TCGGAGCTCC GGTGAATGCA
GAAAAAGCTC TGCGTGCAAT TCGCGAGACC GGCGGAACTG CAGAGTCAGT GACCGATGCC
GAGATTCTTG CTATGCAGCG CGATCTCGCC AGATACGAAG GTATCGGTGT TGAACCTGCA
TCTGCAGCCT CAGTTGCAGG TATCCGCAAG ATGGCGGAGA TGGGACTTCT CGACAAGGAT
GAAAAGATCG TATGTGTCGT GACCGGCCAC CTGCTGAAAG ACCCTGAAAC TGTAATTAAA
CAATGCGCCC CGCCAATCGA GATCGACCCA ACCATCGAAG CACTGCTTGC TGTATTGTAA
 
Protein sequence
MYKLVCVHCG AEYPPDAIVY NCEKCGHLLA VKYDLSKITI THEEILQRPI SLWRYKEFLP 
VQIEPVTLQE GGTPLYHLKR LGEELGLTNL YAKHEGMNPS GSFKDRGMTL GVSMAKQLGK
NIVACASTGN TSASMAVYAA KANMPAVVLL PAGHVALGKV AQALMHGAKV ISIRGNFDRA
LEMVHELCIS HGIYLLNSIN PYRLEGQKTI GFEVVDQLGC VPDRIVLPVG NAGNISAVYK
GLCEWKEIGY IDRLPKMTAI QAEGAAPVVA AIKGQLPEVV VEQNPETVAS AIRIGAPVNA
EKALRAIRET GGTAESVTDA EILAMQRDLA RYEGIGVEPA SAASVAGIRK MAEMGLLDKD
EKIVCVVTGH LLKDPETVIK QCAPPIEIDP TIEALLAVL