Gene Mlab_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1408 
Symbol 
ID4796194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1439439 
End bp1440245 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content54% 
IMG OID640100094 
Productimidazole glycerol phosphate synthase subunit HisF 
Protein accessionYP_001030841 
Protein GI124486225 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTTA CCCGGCGAAT CATTCCCTGT CTTGATCTGA AAGCAGGAAG GGTAGTAAAG 
GGCGTAAATT TTGAAGGGCT TCGCGATGCA GGTGATCCTG TCGAGCTCGC CTCACGATAT
AATGAACAGG GTGCCGATGA GGTCGTATTT CTGGATATTG CGGCCTCGAA GGACAATCGC
GATACGATGA TCGACGTGAT CGGCCGGGCT GCCGATGAGC TGTTTCTTCC GTTGACGGTC
GGCGGCGGGA TTCGTACGGT CAAAGATATT CAGGATATTC TGCGTGCCGG CGCCGATAAG
GTAAGTCTGA ACACGTCTGC GGTAAAAACT CCTGACGTAA TCAACGAAGG ATCACATCTG
TTCGGGAATC AATGTATCGT TCTTGCCGAA GATGTCCGGA GAAATTATGA GATGCGGGAC
GGCGTGACCC CGATCCATCT CGCAGACGGG AGAGTCTGCT GGTATGAAGT GGTCATCTAC
GGTGGCAGCC AGCGGACCGG CATCGATGCG GTCTCCTGGG CGCAGGAAGG TGTCAAAAGA
GGTGCCGGCG AGATCCTTCT CACATCGATG GAAACAGACG GCGTCAAGAC CGGTTTCGAT
TTGGAGATCA CCGCAGCCAT CTCGGAAAAT GTCGATGTTC CGGTGATCGC ATCCGGTGGG
GTCGGGACCC TTGAACATTT TTACGACGGC TTTGTGAAAG GAAAAGCTGA TGCATGCCTT
GCGGCAAGTG TCTTCCATTA CGGAGAGATG ACGATCCGAT CCGTGAAGGA GTATTTGGCT
TCCCGGGGCG TTTTGGTCCG GTTGTAA
 
Protein sequence
MGLTRRIIPC LDLKAGRVVK GVNFEGLRDA GDPVELASRY NEQGADEVVF LDIAASKDNR 
DTMIDVIGRA ADELFLPLTV GGGIRTVKDI QDILRAGADK VSLNTSAVKT PDVINEGSHL
FGNQCIVLAE DVRRNYEMRD GVTPIHLADG RVCWYEVVIY GGSQRTGIDA VSWAQEGVKR
GAGEILLTSM ETDGVKTGFD LEITAAISEN VDVPVIASGG VGTLEHFYDG FVKGKADACL
AASVFHYGEM TIRSVKEYLA SRGVLVRL