| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1397 |
|---|
| Symbol | trpD |
|---|
| ID | 4796162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1426286 |
|---|
| End bp | 1427308 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640100081 |
|---|
| Product | anthranilate phosphoribosyltransferase |
|---|
| Protein accession | YP_001030830 |
|---|
| Protein GI | 124486214 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000237469 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCAG AATGCATTAA AAAAGTAGCA TCACATTCTG ATCTGAGCGT TTACGAGGCA
AAAGGGGCGA TGCAGGATAT CATGTCAGGA AACGCTACCG ATGGTCAGAT CGGCGCATTC
CTTACAGCCC TTGTAATGAA AGGGGAGACA AGTTCCGAGA TCGCCGCTTT TGCATCCGTG
ATGCGGGAGA ACGCCGTCCA AATAACTCCG AAAAGAAACG GTATGCTTGT CGATACATGC
GGCACCGGAG GCGATGGAAA AAACACCTTC AACATCAGTA CGGCAGCGGC TTTTACTGCG
GCCGGTGCTG GAGTGACTGT CGTCAAGCAT GGAAACCGGG GAGCGACCAG CAAATGCGGA
TCCGCTGATG TTCTGGAAGC CCTCGGGATA AAAATCGATA TTTCGCCGGA AAGGGTCTGT
GAAATCATCG ATGAAAACGG CATAGGGTTT ATGTTTGCCC AAAGCCATCA TCCTGCTATG
AAGTATGCGG GCAAGGTGAG AAAGGAGATC GGTATCCGCA GCTTCTTCAA TCTTATCGGT
CCCCTCTCGA ATCCTGCAGG AGCCGATGCA CAGCTGCTTG GGGTCTATGA CTCTCCCCTC
ACGGAAAAGA TCGCCGAAGT TCTCAATATT TTGGGTACGA AAAGAGCAAT GGTTGTCCAT
GGTGATGGAT ATGATGAGAT AACAACGACT GGTATTACTC AGGTTTCCGA GGTGAACGAC
GGGCAGGTCA GGAGTTATTC CTTGGATCCG TCATCCTTCG GGTTCCAAAA AGCCGATGCC
GCCTCCCTCT TCGGTGGAGA TTCTCAGTAC AATGCACACA TAATCAGATC GGTTCTTTCG
GGAGATGAAG GTCCGAGACG GGATATCGTC ATCCTCAATG CCGCAGCTGC AATCTATCTT
GGAGAGAGGG CAGGGAGTAT CGCGGATGGG ATCAAATATG CGGAAAAATC CATCGATTCG
GGCCTTGCGC TCGAGAAACT GGAGAATCTG ATTCTCCTTT CTGGAGGCAA AAATGATTCT
TGA
|
|---|
| Protein sequence | MIAECIKKVA SHSDLSVYEA KGAMQDIMSG NATDGQIGAF LTALVMKGET SSEIAAFASV
MRENAVQITP KRNGMLVDTC GTGGDGKNTF NISTAAAFTA AGAGVTVVKH GNRGATSKCG
SADVLEALGI KIDISPERVC EIIDENGIGF MFAQSHHPAM KYAGKVRKEI GIRSFFNLIG
PLSNPAGADA QLLGVYDSPL TEKIAEVLNI LGTKRAMVVH GDGYDEITTT GITQVSEVND
GQVRSYSLDP SSFGFQKADA ASLFGGDSQY NAHIIRSVLS GDEGPRRDIV ILNAAAAIYL
GERAGSIADG IKYAEKSIDS GLALEKLENL ILLSGGKNDS
|
|---|
| |