| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1393 |
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| Symbol | trpA |
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| ID | 4795820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanocorpusculum labreanum Z |
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| Kingdom | Archaea |
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| Replicon accession | NC_008942 |
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| Strand | - |
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| Start bp | 1422961 |
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| End bp | 1423785 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640100077 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_001030826 |
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| Protein GI | 124486210 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000108372 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCAA AATCCGGAAA AGAGAGGGTT TTTGCAGCGT TTGCAAAACC CGGTTTCGTC
GGATACACCG TTGCCGGCGA TCCAAATATG TCTGATTCGA TTGAGATCGC GAAAGCCTTG
ATCGACGGAG GCTGCGATGT TTTGGAATTG GGAGTTCCCT TTTCCGATCC CGTTGCCGAC
GGAGGTGTGA TCCAGAGCGC TGATAATCGG GCGATTAATG CAGGCATTAC AACCGGAGGT
GTATTTGAGA TCGTGAAAGC GGTTCGAAGT TACTCGGATG TTCCGATCGT ATTTCTTGTC
TACTGCAATA TCGTGTTCCG CCGCGGTATC GACCGATTCT ATGATGAAGC AAAAGAGGCT
GGCGTCGACG GGATTTTGAT TGTTGATATG CCGCCGGAAG AAATCGAGCC TGCCCTGAAA
GCTTCAGAGC GGACCGGGCT CGCACAGATT TTCCTAGTGA CGCAGACGAC CTCGGACGAG
CGGCTTGATA TGATCGTTTC GCTCGCTTCC GGCTTCATCT ATCTGGTCTC TTCCCTTGGG
GTCACCGGAA AGCGTGCTGA GATTTCGGAA AATGCCTTCC CGCTTCTTGA CCGTGTCAAG
GCACGGACCG AGACGCCCGT CGCCGTCGGG TTTGGGATCT CAGAGCCGGC ACATGCTGCT
GAGATCGTCC GCCATGGTGC GGACGGGGTT ATTGTCGGCA GCGCGATTGT TGGAAGGATC
GAGGATCATC TCGGGGATAA AGAAGGAATG CTTGCAGAAC TTAAGGCATA TGTCCGGAGC
ATGAAGAATT CTGTTGACGA TGAAGCGAAG AAACGCGGGA TTTGA
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| Protein sequence | MPAKSGKERV FAAFAKPGFV GYTVAGDPNM SDSIEIAKAL IDGGCDVLEL GVPFSDPVAD
GGVIQSADNR AINAGITTGG VFEIVKAVRS YSDVPIVFLV YCNIVFRRGI DRFYDEAKEA
GVDGILIVDM PPEEIEPALK ASERTGLAQI FLVTQTTSDE RLDMIVSLAS GFIYLVSSLG
VTGKRAEISE NAFPLLDRVK ARTETPVAVG FGISEPAHAA EIVRHGADGV IVGSAIVGRI
EDHLGDKEGM LAELKAYVRS MKNSVDDEAK KRGI
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