Gene Mlab_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1390 
Symbol 
ID4795686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1419845 
End bp1420690 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content48% 
IMG OID640100074 
Productexcinuclease ABC subunit C 
Protein accessionYP_001030823 
Protein GI124486207 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID[TIGR02454] cobalt ABC transporter, permease protein CbiQ 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.416676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCA TAGACGAACT CTTTGATATC GAACACGAGG CGTACCGGAA AAGCCCGGTT 
CATTCCATGG ATGGAAGAGT CAAACTCATC CTTTGTCTTC TGGGATTACT GGTAACGATT
GTTCTGCCTT ACGTAAGAAT AGGCGATCAG ATCATTCCCT GGCCTCAGCT CTTTGCTCTT
CTCGTGATCT ATATGCTGTT TTGGTGTCTC TACCTCATGT CCGGGGCTTC AATCAGATAT
TATCTGGTCA GGCTTGTTCT TATCATGCCG TTTGGGTTGT TTTTCATCAT TCTCCAGCCC
TTCTTTGGAA ACCCGTACTA TGATCTCTAT CATGTCCTGT TCTCTTTCCC GCTTGGGGTA
ACTATGTACT GGGAGTCGCT CATCTTCGGA TGCTCGCTTT TTGCCAAATT CGTTATTTCC
CTCTCGTTCA TCATTCTTCT TTCGGCCACG ACGACGATGC AGGGAATGCT TGAGGCAGCG
TCCCGCCTCC ATATTCCAAA ACTCTTCATC ACGGTCATGA GTCTTACCGT CCGCTATATC
TTCGTCTTCG CATTGATTTT TCAGAAGATC CAGTCGGCAT TTGCCTGCAA ATGTTTCACC
TGGTCCGATC GTCATCTTCC TCTTGCGTAT CGGCTTCGCG TGATCGGCAA CGCGGCCGGA
TCCTTATTTA TTCGTGCCAT CGATCAGGGA GAACGAACCT ATGTTTCGAT GTGCTGCCGG
GGATATGCGG CCGACTCGGC GATGCATTTT TCAAAGAAAC CTCTGGTATT TGCCGAGTGG
ATCTTCCTCT TCTTTGGGGT CGGGTATCTC CTTTTGTTTC CGGCACTGGT TTATATGATA
TTTTAA
 
Protein sequence
MTLIDELFDI EHEAYRKSPV HSMDGRVKLI LCLLGLLVTI VLPYVRIGDQ IIPWPQLFAL 
LVIYMLFWCL YLMSGASIRY YLVRLVLIMP FGLFFIILQP FFGNPYYDLY HVLFSFPLGV
TMYWESLIFG CSLFAKFVIS LSFIILLSAT TTMQGMLEAA SRLHIPKLFI TVMSLTVRYI
FVFALIFQKI QSAFACKCFT WSDRHLPLAY RLRVIGNAAG SLFIRAIDQG ERTYVSMCCR
GYAADSAMHF SKKPLVFAEW IFLFFGVGYL LLFPALVYMI F