| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1371 |
|---|
| Symbol | pheT |
|---|
| ID | 4794850 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 1391975 |
|---|
| End bp | 1393597 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640100056 |
|---|
| Product | phenylalanyl-tRNA synthetase subunit beta |
|---|
| Protein accession | YP_001030805 |
|---|
| Protein GI | 124486189 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
|---|
| TIGRFAM ID | [TIGR00471] phenylalanyl-tRNA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000104238 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATCG TAAAACTCAA TAATGAATAT CTGACCCGTC TGACTGGTAC GGATATAGAA
ACGATCCGTT CCAGTCTTCC TATGATGGGG TCCGAGGTGG AACGCGAGGA GGAGAAACAG
ACGGATGTCC AGTTCTTCCC GAACCGTCCG GATCTGTACA GCGCCGAAGG CACGGCCCGT
GCTCTCCGCG GATATCTGGG AATTGAAACT GGCCTGCCGA CCTACGAAGT CAAGCCGTCG
GGGATATCCT TCAGCGTGGA TCCAAAGCTG GCAAACATCC GGCCGTATCT TGGCTCTGCC
GTTATCAGAA ATGTCCATAT GGACAATGCG ATGATCGAAT CCCTGATGGG TCTGCAGGAA
TCTCTCCACT GGGCAGTCGG ACGCGGCCGC AAGAAGGTTG CGATCGGCGT GCATGATCTC
GATAAGATCG AAGGACCGTT CTCCTATATC GCGGCGGATC GGAAAACAAC ATTCGTGCCG
CTCGATTACG ATGTGGAAAT GACGATGGAA GAGATCCTTG CCGAGCACCC GAAAGGGAAA
GCCTATGCTA GAATCGTGGA AGAGTTCGAG AGATTCCCGC TGATCACCGA TGCAAAAGGC
AGAGTCTGCT CCTTCCCCCC GATCATTAAC GGCGAGCTGA CCAGAGTTAC GGAGGATACA
CAGAATATTC TTCTGGATGT CACCGGAATC GAACCGCGTG CCGTGAGTGT AGCTGTGAAA
ATCCTTTGTG CCGCATTCGT CGAGATGGGA GCGGAGATCG AATCGGTGGA GATCGACGGT
GTCGTCTCAC CCGATCTTCG TCCGGAAAAA CGGACCGTTT CCGTCTCGGA ATGCAGCAAA
CTCACCGGCA TTCCGATGAC TGCATCCCAG ATGACCGAAC TTCTTATGAA GATGCGATTT
GGCGCCGAAG TGATCGATGA GGATACCGTT TCCGTCGATA TCCCCTGTTA TCGGGCCGAC
ATCATGCACG ATCATGATGT GTATGAAGAC GCGGCGATCG CCTACGGATA CGATAAGATC
GAGACAAGCC TGCCGCCGAG TTTCACTGTC GGAAAGCCGC ACCCGGTCCA GAAACTCTAC
AGTCTCGTCA GAAATATTAT GGTCGGACTG TCGTATATCG AGAACACGCC GTTCACGCTG
ACAAGCGGGG ATGTCTCCTA CAGTCTGATG CACAGACCGG AGAACCCGGC AGCTCTGCAC
GTTCTTCACC CGATCAGCGA GGATCAGACG ATCATCCGAA CCGACATCCT GCCGCTTCTG
ATGGAGTCGC TCTCGATCAA CCGTTCCCGC GAACTTCCGC AGAAGATCTT TGCATGCGGC
GACGTAGTGG AAAATCTGGT CACCTATCCG AAGATGGCGG CGGCATCTAT CCACACGTCT
GCGGACTTCT CGGAGATTTA CGCAGTGATG GATGCATTCT GCAGAATGAT GTCGATCGAA
TATGAGGTGC GGGATTCTGC AGATGATGCA TTTATTCCCG GAAGACGCGG CGATATCTAT
GTATCAGGCG AGAAGATAGG CGTCTTCGGC GAGATCAATC CGGATGTTCT CGTCGGATTC
GGACTTGAAC ATCAGGCGGT CGCTTTCGAG ATCGACCTGA GAGGGTTCGT CTCAAACGAA
TAA
|
|---|
| Protein sequence | MPIVKLNNEY LTRLTGTDIE TIRSSLPMMG SEVEREEEKQ TDVQFFPNRP DLYSAEGTAR
ALRGYLGIET GLPTYEVKPS GISFSVDPKL ANIRPYLGSA VIRNVHMDNA MIESLMGLQE
SLHWAVGRGR KKVAIGVHDL DKIEGPFSYI AADRKTTFVP LDYDVEMTME EILAEHPKGK
AYARIVEEFE RFPLITDAKG RVCSFPPIIN GELTRVTEDT QNILLDVTGI EPRAVSVAVK
ILCAAFVEMG AEIESVEIDG VVSPDLRPEK RTVSVSECSK LTGIPMTASQ MTELLMKMRF
GAEVIDEDTV SVDIPCYRAD IMHDHDVYED AAIAYGYDKI ETSLPPSFTV GKPHPVQKLY
SLVRNIMVGL SYIENTPFTL TSGDVSYSLM HRPENPAALH VLHPISEDQT IIRTDILPLL
MESLSINRSR ELPQKIFACG DVVENLVTYP KMAAASIHTS ADFSEIYAVM DAFCRMMSIE
YEVRDSADDA FIPGRRGDIY VSGEKIGVFG EINPDVLVGF GLEHQAVAFE IDLRGFVSNE
|
|---|
| |