Gene Mlab_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1322 
Symbol 
ID4794530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1349226 
End bp1352399 
Gene Length3174 bp 
Protein Length1057 aa 
Translation table11 
GC content61% 
IMG OID640100003 
Producthypothetical protein 
Protein accessionYP_001030756 
Protein GI124486140 
COG category[L] Replication, recombination and repair 
COG ID[COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCG AACTGACCGA GGCCCAGAGA CGGGCGCTCT TTATGGAAGA AAGCGTCTGC 
GTGACCGCGG GCGCCGGGAC CGGGAAGACA TTCCTTTTGA CCAAACGGTA TATCGCCGCG
CTCACCTACC GGCGGGAGAC GATGCATACC GGGGCAAGCG ACATCCTCGC CCTCACCTAC
ACCGACAAGG CGGCGGCCGA GATGCGGACG AAGATCGGCC GGGAACTCAA GAAAGCGGCG
GAAGAGGATC CAGAGCTCGA AGGGGTCTGG GAGAGTTTTT CGCGGTGCAG TATCAGCACG
TTCCACGGAT TCTGCCTCTC GCTTTTGAAG GAGTTCGCCT ACGAGGCAGG ACTCGACGCG
GGATTTTCCG TGATGGACGA GCTCGACACC CACGAACTCG TGACGGGAAC GATCCGTGAG
ATGCTGGAAC ATCCGCCGGC CACCCTTTTC GGCGACGTGG TCACCCTCTT CGATCATCTG
CGGGAGGCAA CGATCGCGGG ATATCTCCAG AGCCTGATGC GGATCGAAGG GGCCAAAGAC
TGGTTTTCTC TGCTGGAGAA AAACCCCTCT GCCGTGATCG CGGTCTGGCA GAAGGCCTGG
GATGAAGAGA TCACGGCGTA TCGAGACGAT CTTGCCGGCG ACGAGCTCGT TAACGCCCTG
ATGGCGGAAC TCCGGGCCCT CGCTCCCGAA CGAAAAGGCG AGCTCTTCCA GGCGGGACCG
GCGGCATTTG CGGCATTCTG CGATGCAAAC GGGCCGGCCG AGATGTATGC CGCAGGAAAA
CTCCTCGCAG GCATAAATAC GAACGCCTAC AAAGCCCCTC TTCCGAAAGG AGGCCTGGAA
CGGTTCAAGG AAAAACGCGA GGTGTTCAAA GAGTTCCCGA CCCACCCGGA CGAATCCGAT
CCGAGAACGC GGCTCACGTT CGAGATCCTC GCGGCCCTCG GACGGGTCGC CTCCGCCGTC
TCTGAAAGAA CGGTCCGCGA AAAACAGCAG AGGGGCGTCC TCGACTTCGA CGACCTGATT
CAAAAGACCC GGGATCTGAT CGAAAACGAC GCCGTTCAGA AAACGCTCAA CGCCAGATAC
CGGTATATCC TCGTCGACGA GGTCCAGGAC AACGACCCGG TCCTCACCGA CATCATCCGG
ATCCTCTGCG GCGACCCGAA AGAGAACAAC CGGCTGTTCA TCGTCGGGGA CGCGAAGCAG
TCGATCTATC TTTTCAGAGG AGCGGACGTC TCCGGATTCA ACGCCTTCCA GACCGTTTTT
GCAAACGATC CCGTGGAACT CGACACGAGT TTTCGGACCG TGCCCGAGAT CATCCGGCTG
GTGAACCACG TATTTTCGTC CGTGTTTGCG GACCCAAAAG AGATCTGGGA GGCCGGATAC
GGCGAGCTCA CCCCCCACCG GGCCGGCCAC TCCGGATCAG TGACCCTGAT CCGGCTTCCA
ACTGGCGAGA CCAAAGCCGA GTCGATGCGG CGTGAGGCAC GGACCCTCGC TTCCTGGATT
TTCGACACGG TTTCCCGCAA AAAACTGAGC GTCTATGATA AAGACGGGAC CTGCCGGCCC
GCACGGTTCG GCGATATCGC GGTCCTCATC GAGGCACGGA CCCATATGGA CAAACTCCGG
CACGCTCTGG AGAGCTACGG GGTCCCCTAT ACCGAGGAGA AGGGATACAG CTTCTATCAA
AAGCAGGAGG TCTTCGACTT CACGAATCTC CTGAAGGCGA TCGTGTATCC CGAGGAGGAC
ATCCCGCTCT ACGGCGTGCT TAAGTCCCCC TACTTCGGGA TCTCCGACGC GGAACTCTGC
CGGGCAGCGG CGGGCAGCGG GCGGCCGCTG ATCTGGCGGC TGCGAAACTA CGCGACCGCG
AATCCCGATT CGAAGATCGG GAAAGCGGTC GGAGATCTCG CCCGCTGGCA TGCGGAGATC
GGAACGGAGC CTTTCGTCCC CTTCCTTTCC CGGCTGATCG CGGAGTCGGG GATCGCGGCG
GTCTACGGCG GCCTCCCGTT CGGGCGGGAA GCGACCGCAA ATCTGGAGAA ACTGGTGGCG
ATCGCCCGTT CGCGTTCCAT GAACCGGCCG TTTTCGGTGT ACGAGTATCT CGGGATCCTG
GACACCTGCA TGGAGGAGGA GTTCGACGAG CGGGAAGGGA TGGTCCCAAG CGAAGAGGAC
GACCGGGTGA AGATCCTCAC CGTGCATGCC TCGAAGGGGC TGGAGTATCC GATCCTCGCC
CTCTGCTTTG CCGGGACGGG GGACGGTCTG AAGGTTTCGG CCCCGGTGTT CGATGCAGAA
CTGGGCGTGG GGATCCCGGT CCGGCTCGCG GGCGAAGGGG AGGGACTTTC ATTCGTGATC
GAGTGCCTGA AGCCGGAGAT GAAGGCAAAA CTACTTGCCG AGCGGAAACG GCTGTTTTAC
GTGGCGATGA CCCGGGCCCG GGACCATCTG GTGATTTCGG GAACGGACGG GAAAAAGGGG
CCGGAGACGA ACTCGTTTTT ATCGATGTAT GATGCGGGGA TCAGCGGATG TCCGTATCTC
CCGGAACTGA TCACGGATTG TGTCGCAGAG CCGGGTGATC TCTGCCGGAT CCGGCCGAAG
GTCCCGGATG GGTGGACGGA TACCCCTCTG CCGACAAAAG AGGAGGAGGC CGCACAAAGC
CTGACCGCGG CCGTGAGAAA CCGGACCCCG TCCGCGGCGG AAGAGGCGGC GATGCTTCGG
GGAACGGCGC TCCACGAGGT GTTCGAGGGT AAGCCGGCGG ATGCGGCGGT GAAACGCTAC
GGACTTCCCC CCGCGGCGGC AGAAGAGTTT GCGGCGAAGT ATGCGGCGTT TCTTGCGTCG
CCTTTGATGC AGAATGCGGC AAAAAGCATC TGCGAGCAGG AGGTCGCGTT TTCCTTTGAA
GGGACTCCCC TGAATGGGGT GATCGACCGG CTGGTTCAAT ATGAGGATGG AAGCTGGATG
ATCATCGATT ATAAAACGGG CCGGCCTTCA AAAATGGAGC TGGAGAGATA CGAGAGCCAG
CTTGCGGTGT ATTTCCTGTG GGCGAAACGT TTGTTCGGGA AGGATCCCGA GGTGTGTCTG
TATCTTTCGG ATAAGAATGA GGTCGTGTCG TTTACGATGG ATGAGGAGCG GGCGATGGGG
CTGGTGGCGG AGAAGATGTG GGAGAACCGG GCGGAGGGGG AACCCACTCC CTAA
 
Protein sequence
MTAELTEAQR RALFMEESVC VTAGAGTGKT FLLTKRYIAA LTYRRETMHT GASDILALTY 
TDKAAAEMRT KIGRELKKAA EEDPELEGVW ESFSRCSIST FHGFCLSLLK EFAYEAGLDA
GFSVMDELDT HELVTGTIRE MLEHPPATLF GDVVTLFDHL REATIAGYLQ SLMRIEGAKD
WFSLLEKNPS AVIAVWQKAW DEEITAYRDD LAGDELVNAL MAELRALAPE RKGELFQAGP
AAFAAFCDAN GPAEMYAAGK LLAGINTNAY KAPLPKGGLE RFKEKREVFK EFPTHPDESD
PRTRLTFEIL AALGRVASAV SERTVREKQQ RGVLDFDDLI QKTRDLIEND AVQKTLNARY
RYILVDEVQD NDPVLTDIIR ILCGDPKENN RLFIVGDAKQ SIYLFRGADV SGFNAFQTVF
ANDPVELDTS FRTVPEIIRL VNHVFSSVFA DPKEIWEAGY GELTPHRAGH SGSVTLIRLP
TGETKAESMR REARTLASWI FDTVSRKKLS VYDKDGTCRP ARFGDIAVLI EARTHMDKLR
HALESYGVPY TEEKGYSFYQ KQEVFDFTNL LKAIVYPEED IPLYGVLKSP YFGISDAELC
RAAAGSGRPL IWRLRNYATA NPDSKIGKAV GDLARWHAEI GTEPFVPFLS RLIAESGIAA
VYGGLPFGRE ATANLEKLVA IARSRSMNRP FSVYEYLGIL DTCMEEEFDE REGMVPSEED
DRVKILTVHA SKGLEYPILA LCFAGTGDGL KVSAPVFDAE LGVGIPVRLA GEGEGLSFVI
ECLKPEMKAK LLAERKRLFY VAMTRARDHL VISGTDGKKG PETNSFLSMY DAGISGCPYL
PELITDCVAE PGDLCRIRPK VPDGWTDTPL PTKEEEAAQS LTAAVRNRTP SAAEEAAMLR
GTALHEVFEG KPADAAVKRY GLPPAAAEEF AAKYAAFLAS PLMQNAAKSI CEQEVAFSFE
GTPLNGVIDR LVQYEDGSWM IIDYKTGRPS KMELERYESQ LAVYFLWAKR LFGKDPEVCL
YLSDKNEVVS FTMDEERAMG LVAEKMWENR AEGEPTP