Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_1322 |
Symbol | |
ID | 4794530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | + |
Start bp | 1349226 |
End bp | 1352399 |
Gene Length | 3174 bp |
Protein Length | 1057 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640100003 |
Product | hypothetical protein |
Protein accession | YP_001030756 |
Protein GI | 124486140 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGCCG AACTGACCGA GGCCCAGAGA CGGGCGCTCT TTATGGAAGA AAGCGTCTGC GTGACCGCGG GCGCCGGGAC CGGGAAGACA TTCCTTTTGA CCAAACGGTA TATCGCCGCG CTCACCTACC GGCGGGAGAC GATGCATACC GGGGCAAGCG ACATCCTCGC CCTCACCTAC ACCGACAAGG CGGCGGCCGA GATGCGGACG AAGATCGGCC GGGAACTCAA GAAAGCGGCG GAAGAGGATC CAGAGCTCGA AGGGGTCTGG GAGAGTTTTT CGCGGTGCAG TATCAGCACG TTCCACGGAT TCTGCCTCTC GCTTTTGAAG GAGTTCGCCT ACGAGGCAGG ACTCGACGCG GGATTTTCCG TGATGGACGA GCTCGACACC CACGAACTCG TGACGGGAAC GATCCGTGAG ATGCTGGAAC ATCCGCCGGC CACCCTTTTC GGCGACGTGG TCACCCTCTT CGATCATCTG CGGGAGGCAA CGATCGCGGG ATATCTCCAG AGCCTGATGC GGATCGAAGG GGCCAAAGAC TGGTTTTCTC TGCTGGAGAA AAACCCCTCT GCCGTGATCG CGGTCTGGCA GAAGGCCTGG GATGAAGAGA TCACGGCGTA TCGAGACGAT CTTGCCGGCG ACGAGCTCGT TAACGCCCTG ATGGCGGAAC TCCGGGCCCT CGCTCCCGAA CGAAAAGGCG AGCTCTTCCA GGCGGGACCG GCGGCATTTG CGGCATTCTG CGATGCAAAC GGGCCGGCCG AGATGTATGC CGCAGGAAAA CTCCTCGCAG GCATAAATAC GAACGCCTAC AAAGCCCCTC TTCCGAAAGG AGGCCTGGAA CGGTTCAAGG AAAAACGCGA GGTGTTCAAA GAGTTCCCGA CCCACCCGGA CGAATCCGAT CCGAGAACGC GGCTCACGTT CGAGATCCTC GCGGCCCTCG GACGGGTCGC CTCCGCCGTC TCTGAAAGAA CGGTCCGCGA AAAACAGCAG AGGGGCGTCC TCGACTTCGA CGACCTGATT CAAAAGACCC GGGATCTGAT CGAAAACGAC GCCGTTCAGA AAACGCTCAA CGCCAGATAC CGGTATATCC TCGTCGACGA GGTCCAGGAC AACGACCCGG TCCTCACCGA CATCATCCGG ATCCTCTGCG GCGACCCGAA AGAGAACAAC CGGCTGTTCA TCGTCGGGGA CGCGAAGCAG TCGATCTATC TTTTCAGAGG AGCGGACGTC TCCGGATTCA ACGCCTTCCA GACCGTTTTT GCAAACGATC CCGTGGAACT CGACACGAGT TTTCGGACCG TGCCCGAGAT CATCCGGCTG GTGAACCACG TATTTTCGTC CGTGTTTGCG GACCCAAAAG AGATCTGGGA GGCCGGATAC GGCGAGCTCA CCCCCCACCG GGCCGGCCAC TCCGGATCAG TGACCCTGAT CCGGCTTCCA ACTGGCGAGA CCAAAGCCGA GTCGATGCGG CGTGAGGCAC GGACCCTCGC TTCCTGGATT TTCGACACGG TTTCCCGCAA AAAACTGAGC GTCTATGATA AAGACGGGAC CTGCCGGCCC GCACGGTTCG GCGATATCGC GGTCCTCATC GAGGCACGGA CCCATATGGA CAAACTCCGG CACGCTCTGG AGAGCTACGG GGTCCCCTAT ACCGAGGAGA AGGGATACAG CTTCTATCAA AAGCAGGAGG TCTTCGACTT CACGAATCTC CTGAAGGCGA TCGTGTATCC CGAGGAGGAC ATCCCGCTCT ACGGCGTGCT TAAGTCCCCC TACTTCGGGA TCTCCGACGC GGAACTCTGC CGGGCAGCGG CGGGCAGCGG GCGGCCGCTG ATCTGGCGGC TGCGAAACTA CGCGACCGCG AATCCCGATT CGAAGATCGG GAAAGCGGTC GGAGATCTCG CCCGCTGGCA TGCGGAGATC GGAACGGAGC CTTTCGTCCC CTTCCTTTCC CGGCTGATCG CGGAGTCGGG GATCGCGGCG GTCTACGGCG GCCTCCCGTT CGGGCGGGAA GCGACCGCAA ATCTGGAGAA ACTGGTGGCG ATCGCCCGTT CGCGTTCCAT GAACCGGCCG TTTTCGGTGT ACGAGTATCT CGGGATCCTG GACACCTGCA TGGAGGAGGA GTTCGACGAG CGGGAAGGGA TGGTCCCAAG CGAAGAGGAC GACCGGGTGA AGATCCTCAC CGTGCATGCC TCGAAGGGGC TGGAGTATCC GATCCTCGCC CTCTGCTTTG CCGGGACGGG GGACGGTCTG AAGGTTTCGG CCCCGGTGTT CGATGCAGAA CTGGGCGTGG GGATCCCGGT CCGGCTCGCG GGCGAAGGGG AGGGACTTTC ATTCGTGATC GAGTGCCTGA AGCCGGAGAT GAAGGCAAAA CTACTTGCCG AGCGGAAACG GCTGTTTTAC GTGGCGATGA CCCGGGCCCG GGACCATCTG GTGATTTCGG GAACGGACGG GAAAAAGGGG CCGGAGACGA ACTCGTTTTT ATCGATGTAT GATGCGGGGA TCAGCGGATG TCCGTATCTC CCGGAACTGA TCACGGATTG TGTCGCAGAG CCGGGTGATC TCTGCCGGAT CCGGCCGAAG GTCCCGGATG GGTGGACGGA TACCCCTCTG CCGACAAAAG AGGAGGAGGC CGCACAAAGC CTGACCGCGG CCGTGAGAAA CCGGACCCCG TCCGCGGCGG AAGAGGCGGC GATGCTTCGG GGAACGGCGC TCCACGAGGT GTTCGAGGGT AAGCCGGCGG ATGCGGCGGT GAAACGCTAC GGACTTCCCC CCGCGGCGGC AGAAGAGTTT GCGGCGAAGT ATGCGGCGTT TCTTGCGTCG CCTTTGATGC AGAATGCGGC AAAAAGCATC TGCGAGCAGG AGGTCGCGTT TTCCTTTGAA GGGACTCCCC TGAATGGGGT GATCGACCGG CTGGTTCAAT ATGAGGATGG AAGCTGGATG ATCATCGATT ATAAAACGGG CCGGCCTTCA AAAATGGAGC TGGAGAGATA CGAGAGCCAG CTTGCGGTGT ATTTCCTGTG GGCGAAACGT TTGTTCGGGA AGGATCCCGA GGTGTGTCTG TATCTTTCGG ATAAGAATGA GGTCGTGTCG TTTACGATGG ATGAGGAGCG GGCGATGGGG CTGGTGGCGG AGAAGATGTG GGAGAACCGG GCGGAGGGGG AACCCACTCC CTAA
|
Protein sequence | MTAELTEAQR RALFMEESVC VTAGAGTGKT FLLTKRYIAA LTYRRETMHT GASDILALTY TDKAAAEMRT KIGRELKKAA EEDPELEGVW ESFSRCSIST FHGFCLSLLK EFAYEAGLDA GFSVMDELDT HELVTGTIRE MLEHPPATLF GDVVTLFDHL REATIAGYLQ SLMRIEGAKD WFSLLEKNPS AVIAVWQKAW DEEITAYRDD LAGDELVNAL MAELRALAPE RKGELFQAGP AAFAAFCDAN GPAEMYAAGK LLAGINTNAY KAPLPKGGLE RFKEKREVFK EFPTHPDESD PRTRLTFEIL AALGRVASAV SERTVREKQQ RGVLDFDDLI QKTRDLIEND AVQKTLNARY RYILVDEVQD NDPVLTDIIR ILCGDPKENN RLFIVGDAKQ SIYLFRGADV SGFNAFQTVF ANDPVELDTS FRTVPEIIRL VNHVFSSVFA DPKEIWEAGY GELTPHRAGH SGSVTLIRLP TGETKAESMR REARTLASWI FDTVSRKKLS VYDKDGTCRP ARFGDIAVLI EARTHMDKLR HALESYGVPY TEEKGYSFYQ KQEVFDFTNL LKAIVYPEED IPLYGVLKSP YFGISDAELC RAAAGSGRPL IWRLRNYATA NPDSKIGKAV GDLARWHAEI GTEPFVPFLS RLIAESGIAA VYGGLPFGRE ATANLEKLVA IARSRSMNRP FSVYEYLGIL DTCMEEEFDE REGMVPSEED DRVKILTVHA SKGLEYPILA LCFAGTGDGL KVSAPVFDAE LGVGIPVRLA GEGEGLSFVI ECLKPEMKAK LLAERKRLFY VAMTRARDHL VISGTDGKKG PETNSFLSMY DAGISGCPYL PELITDCVAE PGDLCRIRPK VPDGWTDTPL PTKEEEAAQS LTAAVRNRTP SAAEEAAMLR GTALHEVFEG KPADAAVKRY GLPPAAAEEF AAKYAAFLAS PLMQNAAKSI CEQEVAFSFE GTPLNGVIDR LVQYEDGSWM IIDYKTGRPS KMELERYESQ LAVYFLWAKR LFGKDPEVCL YLSDKNEVVS FTMDEERAMG LVAEKMWENR AEGEPTP
|
| |