Gene Mlab_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1303 
Symbol 
ID4794547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1327586 
End bp1328728 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content54% 
IMG OID640099985 
ProductDNA primase small subunit 
Protein accessionYP_001030738 
Protein GI124486122 
COG category[L] Replication, recombination and repair 
COG ID[COG1467] Eukaryotic-type DNA primase, catalytic (small) subunit 
TIGRFAM ID[TIGR00335] DNA primase, eukaryotic-type, small subunit, putative 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTG CCACTCTGGA ATTTCTCAGG CAGCGCTTTT TTGCCTACTA CAATGGGGCT 
ATCCCGGGAG CGGGTGCGGG ATATAGCCCC GAATCCCTTA CTGAACGGGA GTGGGGGTTT
CTTTTCTTTA CGGAAAACCA GCGTTCCGGG ATGCGGCGTC ATATCTCGTT CACTTCTCAG
GATGAGCTGA CCTCCTATCT GAAAAGCATG GTTCCGGCTC ATGTGTATTA CTCGACCGCA
TATTACACCC ATCCGGGGGC AGCCCAGATG GCGGATAAAG AGTGGCGCGG GGCTGATGTC
ATCTTCGATT TAGATGCGGA TCATATCGTT CGCGGCCCGT ATGATATCAT GCTTGCCCGT
GTCAAAGAGG AACTTTTCAA ACTCATCGAT ATGCTTACTG GAGAGCTCGG GTTTGCAAAA
CGGGATCTTC GAATCAACTT TTCCGGCGGG CGCGGATATC ATGTCCATCT CCCGCTTCTT
TCCGTTCGGG GCTGGGATAC CGCCGAGCGG CGCGAACTGG TGAATTACGT CTCGGGCACC
GGTCTTTCAT TCGACAGCAT GATGGCCCCC TCCCAAAAAT CCGGCTGGAA GCTTCGCTAT
CACGATGCTC TAAACGATGA ACTCGCCCGG ATCGCGGGAC TGCCGTGTGA AGATGCGCTT
TCCTATTTGT CAGGCTTGTC CGGGATATCG GAGACGTTTG CGGCAGGATT TTTGAAAAAC
ATCTCTCAGA CCCAAAATCT GCTCAAATCG AATCCGGAAA AGCTTCTTGC AAACAAAGTG
GTGCGGGCGA TCGCCAACGC GGAAAATGAA CCGTTCCAGG CAGGAATCCT CTCCCGCGCA
GCCCAGGCGG ACGAGCCGGT AACGACCGAT GTGAAGCGTC TGATCCGTCA CCCCGGCTCT
CTGCACGGAG GATCCGGCAT GCGCGTCGTT CCGATTTCCG TTGATCAGCT GGACGCATTC
GATCCTTTAA TCGATGCCGT GGTGTTTGGC GAACGAAATG TCTCCGTTGA CTGCGCCTTC
AATCTCTCCA TGCCTATCCT TGGGAATAAT TATACGCTGA CAGCGGGCCG AAATGTTGTT
CCCGAGGCAT TGGGCGTTTT TCTCTGCTGC AGAGGGATTG CCGAATTGTC GGGAGGTATC
TGA
 
Protein sequence
MKPATLEFLR QRFFAYYNGA IPGAGAGYSP ESLTEREWGF LFFTENQRSG MRRHISFTSQ 
DELTSYLKSM VPAHVYYSTA YYTHPGAAQM ADKEWRGADV IFDLDADHIV RGPYDIMLAR
VKEELFKLID MLTGELGFAK RDLRINFSGG RGYHVHLPLL SVRGWDTAER RELVNYVSGT
GLSFDSMMAP SQKSGWKLRY HDALNDELAR IAGLPCEDAL SYLSGLSGIS ETFAAGFLKN
ISQTQNLLKS NPEKLLANKV VRAIANAENE PFQAGILSRA AQADEPVTTD VKRLIRHPGS
LHGGSGMRVV PISVDQLDAF DPLIDAVVFG ERNVSVDCAF NLSMPILGNN YTLTAGRNVV
PEALGVFLCC RGIAELSGGI